RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 MRVI1Q9Y6F6 885 aa9.43□□□□□ -0.9
CNN3-205ENST00000474409 DDX49Q9Y6V7 483 aaKnown RBP9.43□□□□□ -0.9
CNN3-205ENST00000474409 MEIS1O00470 390 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 TBX3O15119 743 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 MSH4O15457 936 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 EDIL3O43854 480 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 EIF3JO75822 258 aaKnown RBP9.42□□□□□ -0.9
CNN3-205ENST00000474409 GNRH1P01148 92 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 ITGB5P18084 799 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 PRPHP41219 470 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 TXKP42681 527 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 FLT3LGP49771 235 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 LRCH2Q5VUJ6 765 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 ARL6IP4Q66PJ3 421 aaKnown RBP9.42□□□□□ -0.9
CNN3-205ENST00000474409 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 SEPT14Q6ZU15 432 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 DNAJC5GQ8N7S2 189 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 TMEM87AQ8NBN3 555 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 ETNPPLQ8TBG4 499 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 RAET1EQ8TD07 263 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 FERMT2Q96AC1 680 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 LENG9Q96B70 501 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 INPP4AQ96PE3 977 aaPredicted RBP9.42□□□□□ -0.9
CNN3-205ENST00000474409 UIMC1Q96RL1 719 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 SDF4Q9BRK5 362 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 TINF2Q9BSI4 451 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 ZNF577Q9BSK1 485 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 TEKT3Q9BXF9 490 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 RAB34Q9BZG1 259 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 WDR11Q9BZH6 1224 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 VTA1Q9NP79 307 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 KCNMB3Q9NPA1 279 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 KCNH7Q9NS40 1196 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 SRRDQ9UH36 339 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 RCOR1Q9UKL0 485 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 ZHX1Q9UKY1 873 aaPredicted RBP9.42□□□□□ -0.9
CNN3-205ENST00000474409 GABRQQ9UN88 632 aa9.42□□□□□ -0.9
CNN3-205ENST00000474409 DDX39AO00148 427 aaKnown RBP9.41□□□□□ -0.9
CNN3-205ENST00000474409 IPO5O00410 1097 aaKnown RBP9.41□□□□□ -0.9
CNN3-205ENST00000474409 CHMP2AO43633 222 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 GAS7O60861 476 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 CUTAO60888 179 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 PRPF40AO75400 957 aaKnown RBP9.41□□□□□ -0.9
CNN3-205ENST00000474409 ARP10275 920 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 XRCC5P13010 732 aaKnown RBP9.41□□□□□ -0.9
CNN3-205ENST00000474409 PTMSP20962 102 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 MCM4P33991 863 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 TXLNAP40222 546 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 CCL14Q16627 93 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 OLFML2BQ68BL8 750 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 NCAPH2Q6IBW4 605 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 MAMDC4Q6UXC1 1216 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 RASSF8Q8NHQ8 419 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 MORC4Q8TE76 937 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 USP6NLQ92738 828 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 GJA10Q969M2 543 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 FAM20AQ96MK3 541 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 TTC12Q9H892 705 aaPredicted RBP9.41□□□□□ -0.9
CNN3-205ENST00000474409 AGO4Q9HCK5 861 aaKnown RBP9.41□□□□□ -0.9
CNN3-205ENST00000474409 FBXO2Q9UK22 296 aaPredicted RBP9.41□□□□□ -0.9
CNN3-205ENST00000474409 GJD2Q9UKL4 321 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 PCDHA7Q9UN72 937 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 TRIM17Q9Y577 477 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 MORC2Q9Y6X9 1032 aaPredicted RBP9.41□□□□□ -0.9
CNN3-205ENST00000474409 SCN10AQ9Y5Y9 1956 aa9.41□□□□□ -0.9
CNN3-205ENST00000474409 SIP14410 1827 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 NFASCO94856 1347 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 POTEMA6NI47 508 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 MAFGO15525 162 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 RGS20O76081 388 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 UBA1P22314 1058 aaKnown RBP9.4□□□□□ -0.9
CNN3-205ENST00000474409 ICAM3P32942 547 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 LONP1P36776 959 aaKnown RBP9.4□□□□□ -0.9
CNN3-205ENST00000474409 TECP42680 631 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 FXR2P51116 673 aaKnown RBP eCLIP9.4□□□□□ -0.9
CNN3-205ENST00000474409 PRMT2P55345 433 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 UBE2HP62256 183 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 CAP1Q01518 475 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 GRIN1Q05586 938 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 IRF5Q13568 498 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 TTLL4Q14679 1199 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 MFSD14CQ5VZR4 134 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 KCNV1Q6PIU1 500 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 TRMT44Q8IYL2 757 aaKnown RBP9.4□□□□□ -0.9
CNN3-205ENST00000474409 C4orf32Q8N8J7 132 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 ERMNQ8TAM6 284 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 SCFD2Q8WU76 684 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 TRIB2Q92519 343 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 MRPS27Q92552 414 aaKnown RBP9.4□□□□□ -0.9
CNN3-205ENST00000474409 HAS1Q92839 578 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 SLC5A5Q92911 643 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 CLIC6Q96NY7 704 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 MTMR9Q96QG7 549 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 CSRNP2Q9H175 543 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 ABHD16BQ9H3Z7 469 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 JPH1Q9HDC5 661 aaPredicted RBP9.4□□□□□ -0.9
CNN3-205ENST00000474409 FAM13BQ9NYF5 915 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 FLRT1Q9NZU1 646 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 PCDHA12Q9UN75 941 aa9.4□□□□□ -0.9
CNN3-205ENST00000474409 SRPRBQ9Y5M8 271 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms