RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 SMCO2A6NFE2 343 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 GGPS1O95749 300 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 HOXD8P13378 290 aaPredicted RBP23.16■■□□□ 1.3
HLA-B-252ENST00000474381 CCT2P78371 535 aaKnown RBP23.16■■□□□ 1.3
HLA-B-252ENST00000474381 PKN1Q16512 942 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 NFRKBQ6P4R8 1299 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 NLRX1Q86UT6 975 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 TDHQ8IZJ6 230 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 BADQ92934 168 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 PHKBQ93100 1093 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 CDHR1Q96JP9 859 aa23.16■■□□□ 1.3
HLA-B-252ENST00000474381 NCOA5Q9HCD5 579 aaKnown RBP23.16■■□□□ 1.3
HLA-B-252ENST00000474381 SP2Q02086 613 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 PTPN11Q06124 597 aaPredicted RBP23.15■■□□□ 1.3
HLA-B-252ENST00000474381 AP3B2Q13367 1082 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 NEDD9Q14511 834 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 ANKRD1Q15327 319 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 MCTP2Q6DN12 878 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 GPRASP2Q96D09 838 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 ZFP91Q96JP5 570 aaPredicted RBP23.15■■□□□ 1.3
HLA-B-252ENST00000474381 SENP7Q9BQF6 1050 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 ZMYND12Q9H0C1 365 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 RTEL1Q9NZ71 1219 aa23.15■■□□□ 1.3
HLA-B-252ENST00000474381 PPFIA4O75335 1185 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 TIMP1P01033 207 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 SUPT20HL2P0C7V6 817 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 ITGB8P26012 769 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 CLK2P49760 499 aaKnown RBP23.14■■□□□ 1.29
HLA-B-252ENST00000474381 FXR1P51114 621 aaKnown RBP eCLIP23.14■■□□□ 1.29
HLA-B-252ENST00000474381 SEMA3FQ13275 785 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 NBPF20Q3BBV1 942 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 CPLX2Q6PUV4 134 aaKnown RBP23.14■■□□□ 1.29
HLA-B-252ENST00000474381 TRIM22Q8IYM9 498 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 SPATA33Q96N06 139 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 SLC26A6Q9BXS9 759 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 MLXIPQ9HAP2 919 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 LTBP2Q14767 1821 aa23.14■■□□□ 1.29
HLA-B-252ENST00000474381 CPLX1O14810 134 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 MAFGO15525 162 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 B4GALT4O60513 344 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 SEC24BO95487 1268 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 HSDL1Q3SXM5 330 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 METTL7BQ6UX53 244 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 GIMAP8Q8ND71 665 aaPredicted RBP23.13■■□□□ 1.29
HLA-B-252ENST00000474381 KATNAL1Q9BW62 490 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 C6orf50Q9HD87 102 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 PCDH10Q9P2E7 1040 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 UBIAD1Q9Y5Z9 338 aa23.13■■□□□ 1.29
HLA-B-252ENST00000474381 GNA11P29992 359 aa23.12■■□□□ 1.29
HLA-B-252ENST00000474381 MFSD5Q6N075 450 aa23.12■■□□□ 1.29
HLA-B-252ENST00000474381 SESTD1Q86VW0 696 aa23.12■■□□□ 1.29
HLA-B-252ENST00000474381 CCDC148Q8NFR7 591 aa23.12■■□□□ 1.29
HLA-B-252ENST00000474381 KAT2BQ92831 832 aa23.12■■□□□ 1.29
HLA-B-252ENST00000474381 ANO3Q9BYT9 981 aa23.12■■□□□ 1.29
HLA-B-252ENST00000474381 TRPV6Q9H1D0 765 aa23.12■■□□□ 1.29
HLA-B-252ENST00000474381 F2P00734 622 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 ITGB5P18084 799 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 SREBF1P36956 1147 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 FPGSQ05932 587 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 SSRP1Q08945 709 aaKnown RBP23.11■■□□□ 1.29
HLA-B-252ENST00000474381 LRIT3Q3SXY7 679 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 C8orf34Q49A92 452 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 FAM177A1Q8N128 213 aaPredicted RBP23.11■■□□□ 1.29
HLA-B-252ENST00000474381 BICD2Q8TD16 824 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 LARP6Q9BRS8 491 aaKnown RBP23.11■■□□□ 1.29
HLA-B-252ENST00000474381 JADE2Q9NQC1 790 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 SH3GLB2Q9NR46 395 aa23.11■■□□□ 1.29
HLA-B-252ENST00000474381 SCN10AQ9Y5Y9 1956 aa23.1■■□□□ 1.29
HLA-B-252ENST00000474381 CDKL5O76039 1030 aa23.1■■□□□ 1.29
HLA-B-252ENST00000474381 STK3Q13188 491 aa23.1■■□□□ 1.29
HLA-B-252ENST00000474381 MTMR1Q13613 665 aa23.1■■□□□ 1.29
HLA-B-252ENST00000474381 FAM47CQ5HY64 1035 aa23.1■■□□□ 1.29
HLA-B-252ENST00000474381 HIPK3Q9H422 1215 aa23.1■■□□□ 1.29
HLA-B-252ENST00000474381 HAS3O00219 553 aa23.09■■□□□ 1.29
HLA-B-252ENST00000474381 NOP56O00567 594 aaKnown RBP23.09■■□□□ 1.29
HLA-B-252ENST00000474381 PFKFB2O60825 505 aa23.09■■□□□ 1.29
HLA-B-252ENST00000474381 DEXIO95424 95 aa23.09■■□□□ 1.29
HLA-B-252ENST00000474381 AK2P54819 239 aa23.09■■□□□ 1.29
HLA-B-252ENST00000474381 CYFIP1Q7L576 1253 aa23.09■■□□□ 1.29
HLA-B-252ENST00000474381 REXO1Q8N1G1 1221 aaKnown RBP23.09■■□□□ 1.29
HLA-B-252ENST00000474381 TMEM199Q8N511 208 aa23.09■■□□□ 1.29
HLA-B-252ENST00000474381 MXRA8Q9BRK3 442 aa23.09■■□□□ 1.29
HLA-B-252ENST00000474381 NOC4LQ9BVI4 516 aaKnown RBP23.09■■□□□ 1.29
HLA-B-252ENST00000474381 SLKQ9H2G2 1235 aaPredicted RBP23.09■■□□□ 1.29
HLA-B-252ENST00000474381 TPCN1Q9ULQ1 816 aa23.09■■□□□ 1.29
HLA-B-252ENST00000474381 KCNA2P16389 499 aa23.08■■□□□ 1.29
HLA-B-252ENST00000474381 PSEN2P49810 448 aa23.08■■□□□ 1.29
HLA-B-252ENST00000474381 PPP1R12CQ9BZL4 782 aa23.08■■□□□ 1.29
HLA-B-252ENST00000474381 TRMT13Q9NUP7 481 aaKnown RBP23.08■■□□□ 1.29
HLA-B-252ENST00000474381 TMEM260Q9NX78 707 aa23.08■■□□□ 1.29
HLA-B-252ENST00000474381 TRIOBPQ9H2D6 2365 aa23.08■■□□□ 1.29
HLA-B-252ENST00000474381 SORBS3O60504 671 aa23.07■■□□□ 1.28
HLA-B-252ENST00000474381 PPFIA3O75145 1194 aa23.07■■□□□ 1.28
HLA-B-252ENST00000474381 ZNF286BP0CG31 522 aa23.07■■□□□ 1.28
HLA-B-252ENST00000474381 ARHGAP4P98171 946 aa23.07■■□□□ 1.28
HLA-B-252ENST00000474381 SCRN1Q12765 414 aa23.07■■□□□ 1.28
HLA-B-252ENST00000474381 PPIGQ13427 754 aaKnown RBP eCLIP23.07■■□□□ 1.28
HLA-B-252ENST00000474381 MFSD10Q14728 455 aa23.07■■□□□ 1.28
HLA-B-252ENST00000474381 CEP55Q53EZ4 464 aa23.07■■□□□ 1.28
HLA-B-252ENST00000474381 PGBD1Q96JS3 809 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms