RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 C16orf59Q7L2K0 433 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 KAT2BQ92831 832 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 GPKOWQ92917 476 aaPredicted RBP eCLIP12.86□□□□□ -0.35
CKS1B-206ENST00000474215 RNPC3Q96LT9 517 aaKnown RBP12.86□□□□□ -0.35
CKS1B-206ENST00000474215 SPATA33Q96N06 139 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 AGXT2Q9BYV1 514 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 MLXIPQ9HAP2 919 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 RTEL1Q9NZ71 1219 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
CKS1B-206ENST00000474215 SZT2Q5T011 3432 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 FIBPO43427 364 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 SORBS3O60504 671 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 CYP2C9P11712 490 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 HOXD8P13378 290 aaPredicted RBP12.85□□□□□ -0.35
CKS1B-206ENST00000474215 UBA1P22314 1058 aaKnown RBP12.85□□□□□ -0.35
CKS1B-206ENST00000474215 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.35
CKS1B-206ENST00000474215 HSDL1Q3SXM5 330 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 WWC2Q6AWC2 1192 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 RUFY3Q7L099 469 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 DEFB123Q8N688 67 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.35
CKS1B-206ENST00000474215 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
CKS1B-206ENST00000474215 SPDYE3A6NKU9 549 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 NAPAP54920 295 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 CCL23P55773 120 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 EVCP57679 992 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 SMAD3P84022 425 aaKnown RBP12.84□□□□□ -0.35
CKS1B-206ENST00000474215 NEDD9Q14511 834 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 UBE2SQ16763 222 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 TMEM240Q5SV17 173 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
CKS1B-206ENST00000474215 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 NLRX1Q86UT6 975 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 SESTD1Q86VW0 696 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
CKS1B-206ENST00000474215 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 BCAS3Q9H6U6 928 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 IL23AQ9NPF7 189 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 RIC8AQ9NPQ8 531 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 BARHL2Q9NY43 387 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 PCDHA6Q9UN73 950 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 PCDHA8Q9Y5H6 950 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 CYP46A1Q9Y6A2 500 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
CKS1B-206ENST00000474215 STXBP3O00186 592 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 HAS3O00219 553 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 F2P00734 622 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 FGBP02675 491 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 ACRP10323 421 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 PSEN2P49810 448 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 ADCY7P51828 1080 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 SEMA3FQ13275 785 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 MFSD10Q14728 455 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 PTGISQ16647 500 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 KIAA0753Q2KHM9 967 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 ZNF365Q70YC5 407 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 Q7L0L9 218 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 RPUSD2Q8IZ73 545 aaKnown RBP12.83□□□□□ -0.36
CKS1B-206ENST00000474215 C7orf31Q8N865 590 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 GPRASP2Q96D09 838 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 SENP7Q9BQF6 1050 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 GLT8D2Q9H1C3 349 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 NOD1Q9Y239 953 aa12.83□□□□□ -0.36
CKS1B-206ENST00000474215 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 SMCO2A6NFE2 343 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 NOP56O00567 594 aaKnown RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 PRPF3O43395 683 aaKnown RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 FOSP01100 380 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 ZNF286BP0CG31 522 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 SCG2P13521 617 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 ITGB5P18084 799 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 PDIA3P30101 505 aaKnown RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 BFSP2Q13515 415 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 PFKFB3Q16875 520 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 RASIP1Q5U651 963 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 GDF6Q6KF10 455 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 PSRC1Q6PGN9 363 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 CYFIP1Q7L576 1253 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 RETREG2Q8NC44 543 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 GIMAP8Q8ND71 665 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-206ENST00000474215 SCLYQ96I15 445 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 CDHR1Q96JP9 859 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 C16orf70Q9BSU1 422 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 ALG1Q9BT22 464 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 EHMT1Q9H9B1 1298 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 MTMR10Q9NXD2 777 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 HDAC6Q9UBN7 1215 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
CKS1B-206ENST00000474215 NID2Q14112 1375 aa12.81□□□□□ -0.36
CKS1B-206ENST00000474215 SCN10AQ9Y5Y9 1956 aa12.81□□□□□ -0.36
CKS1B-206ENST00000474215 H3BRB1 525 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms