RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SELPP16109 830 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 KCNA5P22460 613 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 CALML3P27482 149 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 ERVK-21P61565 698 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 RPS6P62753 249 aaKnown RBP6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 CTDSPL2Q05D32 466 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 ARHGAP1Q07960 439 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 PTGISQ16647 500 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 LEXMQ3ZCV2 418 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 ZMYM1Q5SVZ6 1142 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 GDF6Q6KF10 455 aaPredicted RBP6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 CCDC62Q6P9F0 684 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 CNKSR3Q6P9H4 555 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 RNF207Q6ZRF8 634 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 LRRC8DQ7L1W4 858 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 GJD3Q8N144 294 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 CCDC155Q8N6L0 562 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 DNERQ8NFT8 737 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 AFG1LQ8WV93 481 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 TGS1Q96RS0 853 aaKnown RBP6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 RAD9AQ99638 391 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 LARP6Q9BRS8 491 aaKnown RBP6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 IRF2BPLQ9H1B7 796 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 CHMP4BQ9H444 224 aaKnown RBP6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 ANAPC4Q9UJX5 808 aa6.05□□□□□ -1.44
SNRNP40-204ENST00000474025 FRMPD2Q68DX3 1309 aaPredicted RBP6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 WDR19Q8NEZ3 1342 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 TRIP12Q14669 1992 aaPredicted RBP6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 ZFHX2Q9C0A1 2572 aaPredicted RBP6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 ABHD14A-ACY1A0A1B0GW23 586 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 ORC4O43929 436 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 RANBP6O60518 1105 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 PARNO95453 639 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 FGRP09769 529 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 PDHBP11177 359 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 TOP1P11387 765 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 CKBP12277 381 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 IL9P15248 144 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 FOSBP53539 338 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 CHMP4BP1P59074 171 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 NHLH1Q02575 133 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 MBTPS1Q14703 1052 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 PKN1Q16512 942 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 PUS10Q3MIT2 529 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 C20orf194Q5TEA3 1177 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 VPS53Q5VIR6 699 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 TRAF7Q6Q0C0 670 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 PI4K2BQ8TCG2 481 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 KAT2BQ92831 832 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 MFSD14AQ96MC6 490 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 MPHOSPH6Q99547 160 aaKnown RBP6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 ZBED2Q9BTP6 218 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 SLC4A5Q9BY07 1137 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 DCTPP1Q9H773 170 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 GPCPD1Q9NPB8 672 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 PNMA2Q9UL42 364 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 CACNA1HO95180 2353 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 SIP14410 1827 aa6.04□□□□□ -1.44
SNRNP40-204ENST00000474025 MYO7AQ13402 2215 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 TTC41PQ6P2S7 1318 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 SPTBN4Q9H254 2564 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 GRXCR2A6NFK2 248 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 TULP1O00294 542 aaPredicted RBP6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 EFCAB14O75071 495 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 F2P00734 622 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 GH1P01241 217 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 SNHG28P0DPA3 235 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 SSTR3P32745 418 aaPredicted RBP6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 ZNF543Q08ER8 600 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 LY6KQ17RY6 165 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 TRIM71Q2Q1W2 868 aaKnown RBP6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 PTCRAQ6ISU1 281 aaPredicted RBP6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 FAM117BQ6P1L5 589 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 ZNF454Q8N9F8 522 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 NEK9Q8TD19 979 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 OTUD7AQ8TE49 926 aaPredicted RBP6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 WNT8BQ93098 351 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 MRPL38Q96DV4 380 aaKnown RBP6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 UIMC1Q96RL1 719 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 TMEM47Q9BQJ4 181 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 C17orf80Q9BSJ5 609 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 FSD1Q9BTV5 496 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 UPF3BQ9BZI7 483 aaKnown RBP6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 TCP11L1Q9NUJ3 509 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 HCSTQ9UBK5 93 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 HDAC6Q9UBN7 1215 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 FAM50BQ9Y247 325 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 DNAH14Q0VDD8 3507 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 ZDBF2Q9HCK1 2354 aa6.03□□□□□ -1.44
SNRNP40-204ENST00000474025 COL4A6Q14031 1691 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 B4DLN1 442 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 H3BQ06 376 aaPredicted RBP6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 HAS3O00219 553 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 DCXO43602 365 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 LGR5O75473 907 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 ZNF286BP0CG31 522 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 HOXD8P13378 290 aaPredicted RBP6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 CASTP20810 708 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms