RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CELF3Q5SZQ8 465 aaKnown RBP21.7■■□□□ 1.06
PTCD3-210ENST00000473829 XRRA1Q6P2D8 792 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 KCNV1Q6PIU1 500 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 FAM126BQ8IXS8 530 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 DHX37Q8IY37 1157 aaKnown RBP21.7■■□□□ 1.06
PTCD3-210ENST00000473829 PPP1R13LQ8WUF5 828 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 ANO3Q9BYT9 981 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 SLKQ9H2G2 1235 aaPredicted RBP21.7■■□□□ 1.06
PTCD3-210ENST00000473829 VPS54Q9P1Q0 977 aa21.7■■□□□ 1.06
PTCD3-210ENST00000473829 SPATA31C2B4DYI2 1134 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 FIBPO43427 364 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 TGFB3P10600 412 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 ITGB5P18084 799 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 ITGB8P26012 769 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 MDM2Q00987 491 aaPredicted RBP21.69■■□□□ 1.06
PTCD3-210ENST00000473829 SSRP1Q08945 709 aaKnown RBP21.69■■□□□ 1.06
PTCD3-210ENST00000473829 ANKRD1Q15327 319 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 ME3Q16798 604 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 MYSM1Q5VVJ2 828 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 TEX2Q8IWB9 1127 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 TOX2Q96NM4 488 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 AIFM3Q96NN9 605 aa21.69■■□□□ 1.06
PTCD3-210ENST00000473829 MTG1Q9BT17 334 aaPredicted RBP21.69■■□□□ 1.06
PTCD3-210ENST00000473829 CTDNEP1O95476 244 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 AP3B2Q13367 1082 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 LAMC2Q13753 1193 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 HSDL1Q3SXM5 330 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 BRDTQ58F21 947 aaPredicted RBP21.68■■□□□ 1.06
PTCD3-210ENST00000473829 JAKMIP3Q5VZ66 844 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 TRIM22Q8IYM9 498 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 NECAB1Q8N987 351 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 PPTC7Q8NI37 304 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 TELO2Q9Y4R8 837 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 UBIAD1Q9Y5Z9 338 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 MROH7Q68CQ1 1323 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 LAMA3Q16787 3333 aa21.68■■□□□ 1.06
PTCD3-210ENST00000473829 TRIOBPQ9H2D6 2365 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 DCDC2CA8MYV0 355 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 FOSP01100 380 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-210ENST00000473829 RASGRP4Q8TDF6 673 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 CCDC12Q8WUD4 166 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-210ENST00000473829 KAT2BQ92831 832 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 SPATA33Q96N06 139 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 C22orf23Q9BZE7 217 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 GLT8D2Q9H1C3 349 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 EHMT1Q9H9B1 1298 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 C6orf50Q9HD87 102 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 PRKAG2Q9UGJ0 569 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 TBX21Q9UL17 535 aa21.67■■□□□ 1.06
PTCD3-210ENST00000473829 KIAA0355O15063 1070 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 KPNA6O60684 536 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 DEXIO95424 95 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 CD4P01730 458 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 ZNF286BP0CG31 522 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 HOXD8P13378 290 aaPredicted RBP21.66■■□□□ 1.06
PTCD3-210ENST00000473829 SREBF1P36956 1147 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 RBM25P49756 843 aaKnown RBP21.66■■□□□ 1.06
PTCD3-210ENST00000473829 ST3GAL1Q11201 340 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 NBPF20Q3BBV1 942 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 HABP4Q5JVS0 413 aaKnown RBP21.66■■□□□ 1.06
PTCD3-210ENST00000473829 CPLX2Q6PUV4 134 aaKnown RBP21.66■■□□□ 1.06
PTCD3-210ENST00000473829 CCDC148Q8NFR7 591 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 GPRASP2Q96D09 838 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 TMEM39AQ9NV64 488 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
PTCD3-210ENST00000473829 B4GALT4O60513 344 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 ATP9AO75110 1047 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 DGKDQ16760 1214 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 CYFIP1Q7L576 1253 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 NLRX1Q86UT6 975 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 REXO1Q8N1G1 1221 aaKnown RBP21.65■■□□□ 1.06
PTCD3-210ENST00000473829 CYP2W1Q8TAV3 490 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 CRYGNQ8WXF5 182 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 GTF3C6Q969F1 213 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 TRPV6Q9H1D0 765 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 MLXIPQ9HAP2 919 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 JADE2Q9NQC1 790 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 SH3GLB2Q9NR46 395 aa21.65■■□□□ 1.06
PTCD3-210ENST00000473829 STK36Q9NRP7 1315 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 KCNA2P16389 499 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 BMP8BP34820 402 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 ARHGAP4P98171 946 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 MTMR1Q13613 665 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 METTL7BQ6UX53 244 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 BADQ92934 168 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 MXRA8Q9BRK3 442 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 PKD2L1Q9P0L9 805 aa21.64■■□□□ 1.05
PTCD3-210ENST00000473829 CDKL5O76039 1030 aa21.63■■□□□ 1.05
PTCD3-210ENST00000473829 F2P00734 622 aa21.63■■□□□ 1.05
PTCD3-210ENST00000473829 GNA11P29992 359 aa21.63■■□□□ 1.05
PTCD3-210ENST00000473829 CHMP4BP1P59074 171 aa21.63■■□□□ 1.05
PTCD3-210ENST00000473829 NEDD9Q14511 834 aa21.63■■□□□ 1.05
PTCD3-210ENST00000473829 NPY5RQ15761 445 aa21.63■■□□□ 1.05
PTCD3-210ENST00000473829 SENP7Q9BQF6 1050 aa21.63■■□□□ 1.05
PTCD3-210ENST00000473829 TRMT13Q9NUP7 481 aaKnown RBP21.63■■□□□ 1.05
PTCD3-210ENST00000473829 TLR3O15455 904 aaKnown RBP21.62■■□□□ 1.05
PTCD3-210ENST00000473829 RAG1P15918 1043 aa21.62■■□□□ 1.05
PTCD3-210ENST00000473829 NLRP5P59047 1200 aa21.62■■□□□ 1.05
PTCD3-210ENST00000473829 FAM47CQ5HY64 1035 aa21.62■■□□□ 1.05
PTCD3-210ENST00000473829 NFRKBQ6P4R8 1299 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms