RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 PSMA5P28066 241 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 PPP2R5BQ15173 497 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 STXBP2Q15833 593 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 AAK1Q2M2I8 961 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 TMEM63BQ5T3F8 832 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 ARHGEF16Q5VV41 709 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 BLOC1S2Q6QNY1 142 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 TMTC3Q6ZXV5 915 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 FBXL16Q8N461 479 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 SRBD1Q8N5C6 995 aaKnown RBP14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 JAKMIP1Q96N16 626 aaKnown RBP14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 SEZ6LQ9BYH1 1024 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 PXMP2Q9NR77 195 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 SNX14Q9Y5W7 946 aa14.96□□□□□ -0.01
SHROOM3-204ENST00000473602 GCOM1H8Y6P7 765 aaPredicted RBP14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 ZBTB43O43298 467 aa14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 POLR2MP0CAP2 368 aa14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 KCNQ1P51787 676 aa14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 FGD1P98174 961 aa14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 TTLL4Q14679 1199 aa14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 TCEANC2Q96MN5 208 aa14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 CERS4Q9HA82 394 aa14.95□□□□□ -0.02
SHROOM3-204ENST00000473602 EIF3JO75822 258 aaKnown RBP14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 NR3C2P08235 984 aa14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 EIF2AK2P19525 551 aaKnown RBP14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 CPT1AP50416 773 aa14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 RTN1Q16799 776 aa14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 BRDTQ58F21 947 aaPredicted RBP14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 PDCD2LQ9BRP1 358 aa14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 BRPF3Q9ULD4 1205 aa14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 MTCH2Q9Y6C9 303 aa14.94□□□□□ -0.02
SHROOM3-204ENST00000473602 KLF18A0A0U1RQI7 1052 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 GTPBP6O43824 516 aaPredicted RBP14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 EIF5BO60841 1220 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 CA3P07451 260 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 TXNP10599 105 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 CYP2C9P11712 490 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 RPS6KB1P23443 525 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 HOXA13P31271 388 aaPredicted RBP14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 DEFB128Q7Z7B8 93 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 RAB11FIP4Q86YS3 637 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 TEX2Q8IWB9 1127 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 OR6J1Q8NGC5 347 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 PIBF1Q8WXW3 757 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 CUL5Q93034 780 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 USP26Q9BXU7 913 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 AGXT2Q9BYV1 514 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 EPHX3Q9H6B9 360 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 TRMT13Q9NUP7 481 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
SHROOM3-204ENST00000473602 FRMPD4Q14CM0 1322 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 CNTNAP5Q8WYK1 1306 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 PRRC2BQ5JSZ5 2229 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 CCDC196A0A1B0GTZ2 297 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 EPOPA6NHQ4 379 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 GOLGA8AA7E2F4 631 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 GOLGA8BA8MQT2 603 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 hCG_1984214I3L0E3 225 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 PIK3CDO00329 1044 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 SUPT20HL2P0C7V6 817 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 POU3F3P20264 500 aaPredicted RBP14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 CASTP20810 708 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 PGM5Q15124 567 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 KRT40Q6A162 431 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 CCDC62Q6P9F0 684 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 KCNV1Q6PIU1 500 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 Q6ZUG5 572 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 CMTR1Q8N1G2 835 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 ZNF713Q8N859 430 aaPredicted RBP14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 NID2Q14112 1375 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 TCF20Q9UGU0 1960 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 TRANK1O15050 2925 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 MYH7BA7E2Y1 1941 aa14.92□□□□□ -0.02
SHROOM3-204ENST00000473602 SCN10AQ9Y5Y9 1956 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 A6NJR5 290 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 KPNA6O60684 536 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 STAM2O75886 525 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 PFKMP08237 780 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 CCND2P30279 289 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 SEPT14Q6ZU15 432 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 VSIG10LQ86VR7 867 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 CCDC82Q8N4S0 544 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 SMARCC2Q8TAQ2 1214 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 BRF1Q92994 677 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 LRFN3Q9BTN0 628 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 TM6SF1Q9BZW5 370 aa14.91□□□□□ -0.02
SHROOM3-204ENST00000473602 ARIH2O95376 493 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 GH1P01241 217 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 TGFB3P10600 412 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 CPA1P15085 419 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 METAP2P50579 478 aaKnown RBP eCLIP14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 PURAQ00577 322 aaKnown RBP14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 FUT2Q10981 343 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 PPP1R18Q6NYC8 613 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 RUFY3Q7L099 469 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 FCHSD1Q86WN1 690 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 ARNTL2Q8WYA1 636 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 EMID1Q96A84 441 aaPredicted RBP14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 ZSWIM6Q9HCJ5 1215 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms