RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 ZSWIM9Q86XI8 627 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 CCDC144CPQ8IYA2 1237 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 CPLX3Q8WVH0 158 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 KRTAP4-8Q9BYQ9 185 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 ADAMTS10Q9H324 1103 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 FBXL21Q9UKT6 434 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 STRIP2Q9ULQ0 834 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 SLC12A7Q9Y666 1083 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 SZT2Q5T011 3432 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 THSD7BQ9C0I4 1608 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 TIAM2Q8IVF5 1701 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 TOGARAM1Q9Y4F4 1720 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 PRAMEF1O95521 474 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 RAC2P15153 192 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 TMF1P82094 1093 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 ZYXQ15942 572 aaKnown RBP9.6□□□□□ -0.87
A1CF-209ENST00000473480 BBS9Q3SYG4 887 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 RNF111Q6ZNA4 994 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 C19orf47Q8N9M1 422 aaKnown RBP9.6□□□□□ -0.87
A1CF-209ENST00000473480 DHX38Q92620 1227 aaKnown RBP9.6□□□□□ -0.87
A1CF-209ENST00000473480 TCTN2Q96GX1 697 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 ADAMTS7Q9UKP4 1686 aa9.6□□□□□ -0.87
A1CF-209ENST00000473480 LTBP1Q14766 1721 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 IQCA1LA6NCM1 817 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 C9IYK1 514 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 TXKP42681 527 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 HK2P52789 917 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 PCBP3P57721 371 aaKnown RBP9.59□□□□□ -0.87
A1CF-209ENST00000473480 TEKQ02763 1124 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 KCNMB1Q16558 191 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 C7orf61Q8IZ16 206 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 KIRREL1Q96J84 757 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 CAPN10Q9HC96 672 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 CHST7Q9NS84 486 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 CCDC88AQ3V6T2 1871 aa9.59□□□□□ -0.87
A1CF-209ENST00000473480 SSU72P8A0A1W2PR75 194 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 E9PSI1 815 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 GNL2Q13823 731 aaKnown RBP9.58□□□□□ -0.88
A1CF-209ENST00000473480 CYP4F22Q6NT55 531 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 VPS37DQ86XT2 251 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 USHBP1Q8N6Y0 703 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 SHDQ96IW2 340 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 GFOD1Q9NXC2 390 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 ZNF214Q9UL59 606 aaPredicted RBP9.58□□□□□ -0.88
A1CF-209ENST00000473480 PALLDQ8WX93 1383 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 RAB3GAP2Q9H2M9 1393 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 ADGRB1O14514 1584 aa9.58□□□□□ -0.88
A1CF-209ENST00000473480 ZGLP1P0C6A0 271 aa9.57□□□□□ -0.88
A1CF-209ENST00000473480 ATF4P18848 351 aaPredicted RBP9.57□□□□□ -0.88
A1CF-209ENST00000473480 DUSP4Q13115 394 aa9.57□□□□□ -0.88
A1CF-209ENST00000473480 FYB2Q5VWT5 728 aa9.57□□□□□ -0.88
A1CF-209ENST00000473480 TDRD10Q5VZ19 366 aaKnown RBP9.57□□□□□ -0.88
A1CF-209ENST00000473480 PPFIBP1Q86W92 1011 aa9.57□□□□□ -0.88
A1CF-209ENST00000473480 LINC00116Q8NCU8 138 aa9.57□□□□□ -0.88
A1CF-209ENST00000473480 PDZD8Q8NEN9 1154 aa9.57□□□□□ -0.88
A1CF-209ENST00000473480 TCFL5Q9UL49 500 aa9.57□□□□□ -0.88
A1CF-209ENST00000473480 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
A1CF-209ENST00000473480 HPXP02790 462 aa9.56□□□□□ -0.88
A1CF-209ENST00000473480 ANKRD39Q53RE8 183 aa9.56□□□□□ -0.88
A1CF-209ENST00000473480 CNTROBQ8N137 903 aa9.56□□□□□ -0.88
A1CF-209ENST00000473480 OXR1Q8N573 874 aa9.56□□□□□ -0.88
A1CF-209ENST00000473480 FOXP3Q9BZS1 431 aa9.56□□□□□ -0.88
A1CF-209ENST00000473480 PHAXQ9H814 394 aaKnown RBP9.56□□□□□ -0.88
A1CF-209ENST00000473480 ZNF281Q9Y2X9 895 aa9.56□□□□□ -0.88
A1CF-209ENST00000473480 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
A1CF-209ENST00000473480 LTBP3Q9NS15 1303 aa9.56□□□□□ -0.88
A1CF-209ENST00000473480 A0A1W2PQH9 124 aa9.55□□□□□ -0.88
A1CF-209ENST00000473480 DDNO94850 711 aaPredicted RBP9.55□□□□□ -0.88
A1CF-209ENST00000473480 TP53P04637 393 aaPredicted RBP9.55□□□□□ -0.88
A1CF-209ENST00000473480 GLI1P08151 1106 aa9.55□□□□□ -0.88
A1CF-209ENST00000473480 CHRNA5P30532 468 aa9.55□□□□□ -0.88
A1CF-209ENST00000473480 TMEM67Q5HYA8 995 aa9.55□□□□□ -0.88
A1CF-209ENST00000473480 AXDND1Q5T1B0 1012 aaPredicted RBP9.55□□□□□ -0.88
A1CF-209ENST00000473480 DCAF15Q66K64 600 aa9.55□□□□□ -0.88
A1CF-209ENST00000473480 MYLIPQ8WY64 445 aa9.55□□□□□ -0.88
A1CF-209ENST00000473480 TAF1DQ9H5J8 278 aaPredicted RBP9.55□□□□□ -0.88
A1CF-209ENST00000473480 FITM1A5D6W6 292 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 SHOXO15266 292 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 SYPP08247 313 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 RPL10P27635 214 aaKnown RBP9.54□□□□□ -0.88
A1CF-209ENST00000473480 PPP2R5EQ16537 467 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 SPPL2CQ8IUH8 684 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 ABHD4Q8TB40 342 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 ZCRB1Q8TBF4 217 aaKnown RBP9.54□□□□□ -0.88
A1CF-209ENST00000473480 DSCC1Q9BVC3 393 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 FAM53CQ9NYF3 392 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 MINPP1Q9UNW1 487 aa9.54□□□□□ -0.88
A1CF-209ENST00000473480 COL6A3P12111 3177 aa9.53□□□□□ -0.88
A1CF-209ENST00000473480 MEIS1O00470 390 aa9.53□□□□□ -0.88
A1CF-209ENST00000473480 CASP7P55210 303 aa9.53□□□□□ -0.88
A1CF-209ENST00000473480 ERVFC1P60507 584 aa9.53□□□□□ -0.88
A1CF-209ENST00000473480 CHRNEQ04844 493 aa9.53□□□□□ -0.88
A1CF-209ENST00000473480 NOL9Q5SY16 702 aaKnown RBP9.53□□□□□ -0.88
A1CF-209ENST00000473480 DDX21Q9NR30 783 aaKnown RBP eCLIP9.53□□□□□ -0.88
A1CF-209ENST00000473480 FAM86C1Q9NVL1 165 aa9.53□□□□□ -0.88
A1CF-209ENST00000473480 SCN4AP35499 1836 aa9.53□□□□□ -0.88
A1CF-209ENST00000473480 ENDOUP21128 410 aaKnown RBP9.52□□□□□ -0.89
A1CF-209ENST00000473480 BMP8BP34820 402 aa9.52□□□□□ -0.89
A1CF-209ENST00000473480 NR0B2Q15466 257 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms