RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CHST3Q7LGC8 479 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 C7orf31Q8N865 590 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 OTUD7AQ8TE49 926 aaPredicted RBP8.1□□□□□ -1.11
CKS1B-205ENST00000473344 COPS5Q92905 334 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 CCDC136Q96JN2 1154 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 TTC14Q96N46 770 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 IPO9Q96P70 1041 aaKnown RBP8.1□□□□□ -1.11
CKS1B-205ENST00000473344 HELLSQ9NRZ9 838 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 TCP11L1Q9NUJ3 509 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 BDP1A6H8Y1 2624 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 MCM3APO60318 1980 aa8.1□□□□□ -1.11
CKS1B-205ENST00000473344 EPOPA6NHQ4 379 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 FOXP2O15409 715 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 DHX16O60231 1041 aaKnown RBP8.09□□□□□ -1.11
CKS1B-205ENST00000473344 GH1P01241 217 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 FGAP02671 866 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 FGRP09769 529 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 PCP11498 1178 aaKnown RBP8.09□□□□□ -1.11
CKS1B-205ENST00000473344 SELPP16109 830 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 HAND2P61296 217 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.11
CKS1B-205ENST00000473344 ZNF543Q08ER8 600 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 IKBKEQ14164 716 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 ALX1Q15699 326 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 STXBP2Q15833 593 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 DGKDQ16760 1214 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 LY6KQ17RY6 165 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 MCMDC2Q4G0Z9 681 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 ANKRD45Q5TZF3 282 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 GDF6Q6KF10 455 aaPredicted RBP8.09□□□□□ -1.11
CKS1B-205ENST00000473344 CNKSR3Q6P9H4 555 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 SEPT14Q6ZU15 432 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 MCF2L2Q86YR7 1114 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 RGS22Q8NE09 1264 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 NSUN6Q8TEA1 469 aaKnown RBP8.09□□□□□ -1.11
CKS1B-205ENST00000473344 AFG1LQ8WV93 481 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 ESR2Q92731 530 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 KATNAL1Q9BW62 490 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 RNF41Q9H4P4 317 aaPredicted RBP8.09□□□□□ -1.11
CKS1B-205ENST00000473344 LMCD1Q9NZU5 365 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 MTUS1Q9ULD2 1270 aa8.09□□□□□ -1.11
CKS1B-205ENST00000473344 ABHD14A-ACY1A0A1B0GW23 586 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 TRIM6-TRIM34B2RNG4 842 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 ZNF213O14771 459 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 EFCAB14O75071 495 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 ARHGEF15O94989 841 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 ARIH2O95376 493 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 MMP3P08254 477 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 GOLGA8HP0CJ92 632 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 HSPD1P10809 573 aaKnown RBP8.08□□□□□ -1.12
CKS1B-205ENST00000473344 MFAP1P55081 439 aaKnown RBP8.08□□□□□ -1.12
CKS1B-205ENST00000473344 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 TMCO2Q7Z6W1 182 aaPredicted RBP8.08□□□□□ -1.12
CKS1B-205ENST00000473344 SESTD1Q86VW0 696 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 IQCA1Q86XH1 822 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 DHX37Q8IY37 1157 aaKnown RBP8.08□□□□□ -1.12
CKS1B-205ENST00000473344 GDPD5Q8WTR4 605 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 FAM227BQ96M60 508 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 IWS1Q96ST2 819 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 RMDN3Q96TC7 470 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 RAD9AQ99638 391 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 LRFN3Q9BTN0 628 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 UBA5Q9GZZ9 404 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 EPHX3Q9H6B9 360 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 KAT14Q9H8E8 782 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 ARIH1Q9Y4X5 557 aaPredicted RBP8.08□□□□□ -1.12
CKS1B-205ENST00000473344 GBF1Q92538 1859 aa8.08□□□□□ -1.12
CKS1B-205ENST00000473344 ABCB11O95342 1321 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 LCHNA4D1U4 455 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 EIF3JO75822 258 aaKnown RBP8.07□□□□□ -1.12
CKS1B-205ENST00000473344 GJB5O95377 273 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 SNHG28P0DPA3 235 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 CKBP12277 381 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 DEFB103AP81534 67 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 ARHGAP1Q07960 439 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 LAMC2Q13753 1193 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 CDC37Q16543 378 aaPredicted RBP8.07□□□□□ -1.12
CKS1B-205ENST00000473344 CCDC178Q5BJE1 867 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 FAM117BQ6P1L5 589 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 CCDC62Q6P9F0 684 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 DGKHQ86XP1 1220 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 PNMA1Q8ND90 353 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 RILPL2Q969X0 211 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 PKNOX2Q96KN3 472 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 TAAR1Q96RJ0 339 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 TGS1Q96RS0 853 aaKnown RBP8.07□□□□□ -1.12
CKS1B-205ENST00000473344 ZKSCAN3Q9BRR0 538 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 ALG1Q9BT22 464 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 MAF1Q9H063 256 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 HDAC6Q9UBN7 1215 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 GTF2IRD1Q9UHL9 959 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 MRPL11Q9Y3B7 192 aaKnown RBP8.07□□□□□ -1.12
CKS1B-205ENST00000473344 PCDHB15Q9Y5E8 787 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 MRVI1Q9Y6F6 885 aa8.07□□□□□ -1.12
CKS1B-205ENST00000473344 ZMYM6O95789 1325 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 CCDC171Q6TFL3 1326 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 A0A0D9SFI3 127 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 LPXNO60711 386 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 NBNO60934 754 aa8.06□□□□□ -1.12
CKS1B-205ENST00000473344 CFBP00751 764 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms