RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 INTS11Q5TA45 600 aaKnown RBP6.93□□□□□ -1.3
RTF1-203ENST00000473214 HGSNATQ68CP4 663 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 C4orf50Q6ZRC1 276 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 DAAM2Q86T65 1068 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 SLC41A1Q8IVJ1 513 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 AFAP1L1Q8TED9 768 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 ZFPM2Q8WW38 1151 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 USP7Q93009 1102 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 SH3KBP1Q96B97 665 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 CENPTQ96BT3 561 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 ZMAT2Q96NC0 199 aaKnown RBP6.93□□□□□ -1.3
RTF1-203ENST00000473214 TTC1Q99614 292 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 FNIP2Q9P278 1114 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 RABL2BQ9UNT1 228 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 GIT1Q9Y2X7 761 aa6.93□□□□□ -1.3
RTF1-203ENST00000473214 TCOF1Q13428 1488 aaKnown RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 MYO3AQ8NEV4 1616 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 TRIM64A6NGJ6 449 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 TRIM64BA6NI03 449 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 FAM155AB1AL88 458 aaPredicted RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 GOLGA6L22H0YM25 854 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 M0R3H8 397 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 PLOD3O60568 738 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 FBXO24O75426 580 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 CD4P01730 458 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 ASGR2P07307 311 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 NAT2P11245 290 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 RAC2P15153 192 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 ZNF165P49910 485 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 COPAP53621 1224 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 MPP1Q00013 466 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 PPP2R5CQ13362 524 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 TRIM29Q14134 588 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 PCBP1Q15365 356 aaKnown RBP eCLIP6.92□□□□□ -1.3
RTF1-203ENST00000473214 SLC10A6Q3KNW5 377 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 HSP90AB3PQ58FF7 597 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 CC2D1BQ5T0F9 858 aaKnown RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 SPATA1Q5VX52 437 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 FOXB2Q5VYV0 432 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 CCDC73Q6ZRK6 1079 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 HFE2Q6ZVN8 426 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 CATIPQ7Z7H3 387 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 C7orf61Q8IZ16 206 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 FBXO27Q8NI29 283 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 NSUN6Q8TEA1 469 aaKnown RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 SNX29Q8TEQ0 813 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 HDAC2Q92769 488 aaKnown RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 SMARCC1Q92922 1105 aaPredicted RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 PLD4Q96BZ4 506 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 EXOC2Q96KP1 924 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 MAP3K14Q99558 947 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 BARD1Q99728 777 aaKnown RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 SLC26A6Q9BXS9 759 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 DBNDD1Q9H9R9 158 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 ZFYVE28Q9HCC9 887 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 TCF7L1Q9HCS4 588 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 ANKEF1Q9NU02 776 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 TLR7Q9NYK1 1049 aaKnown RBP6.92□□□□□ -1.3
RTF1-203ENST00000473214 GPR52Q9Y2T5 361 aa6.92□□□□□ -1.3
RTF1-203ENST00000473214 CDK13Q14004 1512 aaKnown RBP6.91□□□□□ -1.3
RTF1-203ENST00000473214 KDM5CP41229 1560 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
RTF1-203ENST00000473214 ALX3O95076 343 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 TAL1P17542 331 aaPredicted RBP6.91□□□□□ -1.3
RTF1-203ENST00000473214 CASQ1P31415 396 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 HOXD12P35452 270 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 SSR1P43307 286 aaKnown RBP6.91□□□□□ -1.3
RTF1-203ENST00000473214 ZNF132P52740 706 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 E2F5Q15329 346 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 NBPF8Q3BBV2 869 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 RGL3Q3MIN7 710 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 ITPRIPL1Q6GPH6 555 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 RETSATQ6NUM9 610 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 TMCO3Q6UWJ1 677 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 CCDC129Q6ZRS4 1044 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 Q6ZS46 218 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 FASTKD5Q7L8L6 764 aaKnown RBP6.91□□□□□ -1.3
RTF1-203ENST00000473214 WAPLQ7Z5K2 1190 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 TREML1Q86YW5 311 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 SLFN12Q8IYM2 578 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 CPA6Q8N4T0 437 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 MYCT1Q8N699 235 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 LSMEM1Q8N8F7 131 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 C3orf58Q8NDZ4 430 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 IPCEF1Q8WWN9 437 aaPredicted RBP6.91□□□□□ -1.3
RTF1-203ENST00000473214 VMP1Q96GC9 406 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 CDC6Q99741 560 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 ISCA1Q9BUE6 129 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 CARD10Q9BWT7 1032 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 SLC12A5Q9H2X9 1139 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 ATP6V0A4Q9HBG4 840 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 PPP4R2Q9NY27 417 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 SUCOQ9UBS9 1254 aaKnown RBP6.91□□□□□ -1.3
RTF1-203ENST00000473214 ZNRF3Q9ULT6 936 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 NEURL4Q96JN8 1562 aa6.91□□□□□ -1.3
RTF1-203ENST00000473214 ZNF142P52746 1687 aaPredicted RBP6.9□□□□□ -1.3
RTF1-203ENST00000473214 IQCA1LA6NCM1 817 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 NEMP1O14524 444 aa6.9□□□□□ -1.3
RTF1-203ENST00000473214 CPLX1O14810 134 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms