RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SCFD2Q8WU76 684 aa15.03■□□□□ -0
TPM3-216ENST00000473036 INPP4AQ96PE3 977 aaPredicted RBP15.03■□□□□ -0
TPM3-216ENST00000473036 KCNJ14Q9UNX9 436 aa15.03■□□□□ -0
TPM3-216ENST00000473036 PHF24Q9UPV7 400 aa15.03■□□□□ -0
TPM3-216ENST00000473036 EYSQ5T1H1 3165 aa15.03■□□□□ -0
TPM3-216ENST00000473036 SPTBN5Q9NRC6 3674 aaKnown RBP15.02■□□□□ -0
TPM3-216ENST00000473036 TXNP10599 105 aaKnown RBP15.02■□□□□ -0
TPM3-216ENST00000473036 ACLYP53396 1101 aa15.02■□□□□ -0
TPM3-216ENST00000473036 RNF180Q86T96 592 aa15.02■□□□□ -0
TPM3-216ENST00000473036 TRIM22Q8IYM9 498 aa15.02■□□□□ -0
TPM3-216ENST00000473036 ANO3Q9BYT9 981 aa15.02■□□□□ -0
TPM3-216ENST00000473036 Q9Y3F1 56 aa15.02■□□□□ -0
TPM3-216ENST00000473036 GRIN2DO15399 1336 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 A0A1W2PQ45 241 aaPredicted RBP15.01□□□□□ -0.01
TPM3-216ENST00000473036 A0A1W2PQY0 241 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 SPDYE3A6NKU9 549 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 B4DLN1 442 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 SPATA31C2B4DYI2 1134 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 SORBS3O60504 671 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 ATP9AO75110 1047 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 ASGR1P07306 291 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 ICAM3P32942 547 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 ATN1P54259 1190 aaPredicted RBP15.01□□□□□ -0.01
TPM3-216ENST00000473036 RTP1P59025 263 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 TTLL4Q14679 1199 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 SNX17Q15036 470 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 FSCN1Q16658 493 aaKnown RBP15.01□□□□□ -0.01
TPM3-216ENST00000473036 GNASQ5JWF2 1037 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 OR6J1Q8NGC5 347 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 SYMPKQ92797 1274 aaKnown RBP15.01□□□□□ -0.01
TPM3-216ENST00000473036 MPHOSPH6Q99547 160 aaKnown RBP15.01□□□□□ -0.01
TPM3-216ENST00000473036 SH3GLB2Q9NR46 395 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 ORC3Q9UBD5 711 aaPredicted RBP15.01□□□□□ -0.01
TPM3-216ENST00000473036 UBIAD1Q9Y5Z9 338 aa15.01□□□□□ -0.01
TPM3-216ENST00000473036 KBTBD13C9JR72 458 aa15□□□□□ -0.01
TPM3-216ENST00000473036 CDKL5O76039 1030 aa15□□□□□ -0.01
TPM3-216ENST00000473036 UBA1P22314 1058 aaKnown RBP15□□□□□ -0.01
TPM3-216ENST00000473036 SREBF1P36956 1147 aa15□□□□□ -0.01
TPM3-216ENST00000473036 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
TPM3-216ENST00000473036 CPLX2Q6PUV4 134 aaKnown RBP15□□□□□ -0.01
TPM3-216ENST00000473036 OXER1Q8TDS5 423 aa15□□□□□ -0.01
TPM3-216ENST00000473036 TSEN34Q9BSV6 310 aaKnown RBP15□□□□□ -0.01
TPM3-216ENST00000473036 PHF20Q9BVI0 1012 aa15□□□□□ -0.01
TPM3-216ENST00000473036 C6orf50Q9HD87 102 aa15□□□□□ -0.01
TPM3-216ENST00000473036 PCDHA4Q9UN74 947 aa15□□□□□ -0.01
TPM3-216ENST00000473036 MRVI1Q9Y6F6 885 aa15□□□□□ -0.01
TPM3-216ENST00000473036 SCN10AQ9Y5Y9 1956 aa15□□□□□ -0.01
TPM3-216ENST00000473036 A6NJR5 290 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 FAM86B1E9PN63 330 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 FAM86B2P0C5J1 330 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 NLRP5P59047 1200 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 AP3B2Q13367 1082 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 EARS2Q5JPH6 523 aaKnown RBP14.99□□□□□ -0.01
TPM3-216ENST00000473036 CXCL17Q6UXB2 119 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 SLC39A5Q6ZMH5 540 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 TEX2Q8IWB9 1127 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 REXO1Q8N1G1 1221 aaKnown RBP14.99□□□□□ -0.01
TPM3-216ENST00000473036 DAGLBQ8NCG7 672 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 CCDC148Q8NFR7 591 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 MAFAQ8NHW3 353 aaPredicted RBP14.99□□□□□ -0.01
TPM3-216ENST00000473036 CCDC12Q8WUD4 166 aaPredicted RBP14.99□□□□□ -0.01
TPM3-216ENST00000473036 PPP1R13LQ8WUF5 828 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 AFG1LQ8WV93 481 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 EMID1Q96A84 441 aaPredicted RBP14.99□□□□□ -0.01
TPM3-216ENST00000473036 TMX3Q96JJ7 454 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 ZSCAN31Q96LW9 406 aaPredicted RBP14.99□□□□□ -0.01
TPM3-216ENST00000473036 CDX2Q99626 313 aaPredicted RBP14.99□□□□□ -0.01
TPM3-216ENST00000473036 ALG1Q9BT22 464 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 AP5M1Q9H0R1 490 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 SEMA6BQ9H3T3 888 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 PRUNE2Q8WUY3 3088 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 LTBP2Q14767 1821 aa14.99□□□□□ -0.01
TPM3-216ENST00000473036 IGLV3-22A0A075B6J6 115 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 MOXD2PA6NHM9 499 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 NKRFO15226 690 aaKnown RBP eCLIP14.98□□□□□ -0.01
TPM3-216ENST00000473036 STAM2O75886 525 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 FOSP01100 380 aaPredicted RBP14.98□□□□□ -0.01
TPM3-216ENST00000473036 ARP10275 920 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 KCNA2P16389 499 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 GNA11P29992 359 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 FOSBP53539 338 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 ARHGAP4P98171 946 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 HSDL1Q3SXM5 330 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 CELF3Q5SZQ8 465 aaKnown RBP14.98□□□□□ -0.01
TPM3-216ENST00000473036 XRRA1Q6P2D8 792 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 BLIDQ8IZY5 108 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 MXRA8Q9BRK3 442 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 GLT8D2Q9H1C3 349 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 JADE2Q9NQC1 790 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 SH2B1Q9NRF2 756 aaPredicted RBP14.98□□□□□ -0.01
TPM3-216ENST00000473036 TTC28Q96AY4 2481 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 CDH23Q9H251 3354 aa14.98□□□□□ -0.01
TPM3-216ENST00000473036 FAM205CA6NFA0 338 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 MEIS1O00470 390 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 GGPS1O95749 300 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 GH1P01241 217 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 MMP3P08254 477 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 CYP3A4P08684 503 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 TGFB3P10600 412 aa14.97□□□□□ -0.01
TPM3-216ENST00000473036 CDK7P50613 346 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms