RNA–Protein interactions for RNA: ENST00000472876.5

SPECC1-209, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3

Gene SPECC1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-209ENST00000472876 GPKOWQ92917 476 aaPredicted RBP eCLIP18.33■□□□□ 0.52
SPECC1-209ENST00000472876 AMNQ9BXJ7 453 aa18.33■□□□□ 0.52
SPECC1-209ENST00000472876 AP5M1Q9H0R1 490 aa18.33■□□□□ 0.52
SPECC1-209ENST00000472876 SEC63Q9UGP8 760 aaKnown RBP18.33■□□□□ 0.52
SPECC1-209ENST00000472876 ALDH5A1P51649 535 aaPredicted RBP18.32■□□□□ 0.52
SPECC1-209ENST00000472876 CUL4AQ13619 759 aa18.32■□□□□ 0.52
SPECC1-209ENST00000472876 PFKFB3Q16875 520 aaPredicted RBP18.32■□□□□ 0.52
SPECC1-209ENST00000472876 DUSP28Q4G0W2 176 aa18.32■□□□□ 0.52
SPECC1-209ENST00000472876 SMARCC2Q8TAQ2 1214 aa18.32■□□□□ 0.52
SPECC1-209ENST00000472876 AIFM3Q96NN9 605 aa18.32■□□□□ 0.52
SPECC1-209ENST00000472876 PRDM6Q9NQX0 595 aa18.32■□□□□ 0.52
SPECC1-209ENST00000472876 YBX2Q9Y2T7 364 aaKnown RBP18.32■□□□□ 0.52
SPECC1-209ENST00000472876 REV3LO60673 3130 aa18.32■□□□□ 0.52
SPECC1-209ENST00000472876 TTC28Q96AY4 2481 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 BAZ2BQ9UIF8 2168 aaKnown RBP18.31■□□□□ 0.52
SPECC1-209ENST00000472876 RBM47A0AV96 593 aaKnown RBP18.31■□□□□ 0.52
SPECC1-209ENST00000472876 CDKL5O76039 1030 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 SCG2P13521 617 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 CCL23P55773 120 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 SSRP1Q08945 709 aaKnown RBP18.31■□□□□ 0.52
SPECC1-209ENST00000472876 ADGRE1Q14246 886 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
SPECC1-209ENST00000472876 SLC30A10Q6XR72 485 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 HEATR3Q7Z4Q2 680 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 SEZ6LQ9BYH1 1024 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 PRDM12Q9H4Q4 367 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 PCDHA1Q9Y5I3 950 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 SCN10AQ9Y5Y9 1956 aa18.31■□□□□ 0.52
SPECC1-209ENST00000472876 ABCB11O95342 1321 aa18.3■□□□□ 0.52
SPECC1-209ENST00000472876 STXBP3O00186 592 aa18.3■□□□□ 0.52
SPECC1-209ENST00000472876 ZEB2O60315 1214 aa18.3■□□□□ 0.52
SPECC1-209ENST00000472876 FGBP02675 491 aa18.3■□□□□ 0.52
SPECC1-209ENST00000472876 PURAQ00577 322 aaKnown RBP18.3■□□□□ 0.52
SPECC1-209ENST00000472876 OTOP2Q7RTS6 562 aa18.3■□□□□ 0.52
SPECC1-209ENST00000472876 TRIM22Q8IYM9 498 aa18.3■□□□□ 0.52
SPECC1-209ENST00000472876 LLPHQ9BRT6 129 aaKnown RBP18.3■□□□□ 0.52
SPECC1-209ENST00000472876 SCN5AQ14524 2016 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 LOC102724159A0A0B4J2E5 919 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 DEXIO95424 95 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 PWP2Q15269 919 aaKnown RBP18.29■□□□□ 0.52
SPECC1-209ENST00000472876 RAB30Q15771 203 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 WDR11Q9BZH6 1224 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 NKX2-4Q9H2Z4 354 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 TRMT13Q9NUP7 481 aaKnown RBP18.29■□□□□ 0.52
SPECC1-209ENST00000472876 BARHL2Q9NY43 387 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 ORC3Q9UBD5 711 aaPredicted RBP18.29■□□□□ 0.52
SPECC1-209ENST00000472876 ADD3Q9UEY8 706 aaKnown RBP18.29■□□□□ 0.52
SPECC1-209ENST00000472876 PNMA2Q9UL42 364 aa18.29■□□□□ 0.52
SPECC1-209ENST00000472876 EDNRBP24530 442 aa18.28■□□□□ 0.52
SPECC1-209ENST00000472876 TJAP1Q5JTD0 557 aa18.28■□□□□ 0.52
SPECC1-209ENST00000472876 SCLYQ96I15 445 aa18.28■□□□□ 0.52
SPECC1-209ENST00000472876 TSHZ2Q9NRE2 1034 aa18.28■□□□□ 0.52
SPECC1-209ENST00000472876 TANC1Q9C0D5 1861 aa18.28■□□□□ 0.52
SPECC1-209ENST00000472876 MYH6P13533 1939 aa18.27■□□□□ 0.52
SPECC1-209ENST00000472876 hCG_1984214I3L0E3 225 aa18.27■□□□□ 0.52
SPECC1-209ENST00000472876 ADAMTS3O15072 1205 aa18.27■□□□□ 0.52
SPECC1-209ENST00000472876 AKAP17AQ02040 695 aaKnown RBP18.27■□□□□ 0.52
SPECC1-209ENST00000472876 GHRHRQ02643 423 aa18.27■□□□□ 0.52
SPECC1-209ENST00000472876 ZNF713Q8N859 430 aaPredicted RBP18.27■□□□□ 0.52
SPECC1-209ENST00000472876 TBC1D5Q92609 795 aa18.27■□□□□ 0.52
SPECC1-209ENST00000472876 SYMPKQ92797 1274 aaKnown RBP18.27■□□□□ 0.52
SPECC1-209ENST00000472876 GAS2L1Q99501 681 aaPredicted RBP18.27■□□□□ 0.52
SPECC1-209ENST00000472876 GJB4Q9NTQ9 266 aa18.27■□□□□ 0.52
SPECC1-209ENST00000472876 VPS54Q9P1Q0 977 aa18.27■□□□□ 0.52
SPECC1-209ENST00000472876 MSRAQ9UJ68 235 aa18.27■□□□□ 0.52
SPECC1-209ENST00000472876 MRPL11Q9Y3B7 192 aaKnown RBP18.27■□□□□ 0.52
SPECC1-209ENST00000472876 CYP2C9P11712 490 aa18.26■□□□□ 0.51
SPECC1-209ENST00000472876 CALML3P27482 149 aa18.26■□□□□ 0.51
SPECC1-209ENST00000472876 RABGGTBP53611 331 aa18.26■□□□□ 0.51
SPECC1-209ENST00000472876 NAPAP54920 295 aa18.26■□□□□ 0.51
SPECC1-209ENST00000472876 RPS6P62753 249 aaKnown RBP18.26■□□□□ 0.51
SPECC1-209ENST00000472876 PPP1R18Q6NYC8 613 aa18.26■□□□□ 0.51
SPECC1-209ENST00000472876 RNF207Q6ZRF8 634 aa18.26■□□□□ 0.51
SPECC1-209ENST00000472876 MTIF3Q9H2K0 278 aaKnown RBP18.26■□□□□ 0.51
SPECC1-209ENST00000472876 POLR3EQ9NVU0 708 aa18.26■□□□□ 0.51
SPECC1-209ENST00000472876 MYO9BQ13459 2157 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 XIRP2A4UGR9 3374 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 MYOGP15173 224 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 CPT1AP50416 773 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 HSD17B4P51659 736 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 TRAF1Q13077 416 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 PPP1R13LQ8WUF5 828 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 PPM1EQ8WY54 764 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 ALG1Q9BT22 464 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 COL20A1Q9P218 1284 aa18.25■□□□□ 0.51
SPECC1-209ENST00000472876 TRANK1O15050 2925 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 A6NJR5 290 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 ARIH2O95376 493 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 MYL3P08590 195 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 HMGN5P82970 282 aaKnown RBP18.24■□□□□ 0.51
SPECC1-209ENST00000472876 TTLL4Q14679 1199 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 NPY5RQ15761 445 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 RGS22Q8NE09 1264 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 DNERQ8NFT8 737 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 OR6J1Q8NGC5 347 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 COPS5Q92905 334 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 MTG1Q9BT17 334 aaPredicted RBP18.24■□□□□ 0.51
SPECC1-209ENST00000472876 SLC28A3Q9HAS3 691 aa18.24■□□□□ 0.51
SPECC1-209ENST00000472876 SLC4A7Q9Y6M7 1214 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms