RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SHHQ15465 462 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 TKFCQ3LXA3 575 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 NSMFQ6X4W1 530 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 NFXL1Q6ZNB6 911 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 EEPD1Q7L9B9 569 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 CYP4X1Q8N118 509 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 FAM160A2Q8N612 972 aaPredicted RBP10.62□□□□□ -0.71
SMC4-213ENST00000472282 UPF3BQ9BZI7 483 aaKnown RBP10.62□□□□□ -0.71
SMC4-213ENST00000472282 UPF3AQ9H1J1 476 aaKnown RBP10.62□□□□□ -0.71
SMC4-213ENST00000472282 STARD7Q9NQZ5 370 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 PRKAG2Q9UGJ0 569 aa10.62□□□□□ -0.71
SMC4-213ENST00000472282 PQBP1O60828 265 aaKnown RBP10.61□□□□□ -0.71
SMC4-213ENST00000472282 ASGR1P07306 291 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 CLTBP09497 229 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 CST5P28325 142 aaPredicted RBP10.61□□□□□ -0.71
SMC4-213ENST00000472282 LIFRP42702 1097 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 GJA9P57773 515 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 FGD1P98174 961 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 FAAP100Q0VG06 881 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 BAATQ14032 418 aaPredicted RBP10.61□□□□□ -0.71
SMC4-213ENST00000472282 TAPT1Q6NXT6 567 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 SLC30A10Q6XR72 485 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 Q6ZUG5 572 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 RUFY3Q7L099 469 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 RAB11FIP4Q86YS3 637 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 FBXO16Q8IX29 292 aaPredicted RBP10.61□□□□□ -0.71
SMC4-213ENST00000472282 ZNF654Q8IZM8 581 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 CLEC4DQ8WXI8 215 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 PHOX2BQ99453 314 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 TSEN34Q9BSV6 310 aaKnown RBP10.61□□□□□ -0.71
SMC4-213ENST00000472282 MYL10Q9BUA6 226 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 TM6SF1Q9BZW5 370 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 UBA5Q9GZZ9 404 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 GNEQ9Y223 722 aaKnown RBP10.61□□□□□ -0.71
SMC4-213ENST00000472282 SCN5AQ14524 2016 aa10.61□□□□□ -0.71
SMC4-213ENST00000472282 LAMA3Q16787 3333 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 DOCK5Q9H7D0 1870 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 LOC100996750A0A140TA64 210 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 MOXD2PA6NHM9 499 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 DDAH1O94760 285 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 PARP1P09874 1014 aaKnown RBP10.6□□□□□ -0.71
SMC4-213ENST00000472282 SMPD1P17405 629 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 RXRAP19793 462 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 TROAPQ12815 778 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 GRM4Q14833 912 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 GPATCH4Q5T3I0 446 aaKnown RBP10.6□□□□□ -0.71
SMC4-213ENST00000472282 CATIPQ7Z7H3 387 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 SGMS1Q86VZ5 419 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 TMTC2Q8N394 836 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 STAG2Q8N3U4 1231 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 DEFB123Q8N688 67 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 KRTAP4-6Q9BYQ5 205 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 BACH2Q9BYV9 841 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 C22orf23Q9BZE7 217 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 UPF2Q9HAU5 1272 aaKnown RBP10.6□□□□□ -0.71
SMC4-213ENST00000472282 CYP46A1Q9Y6A2 500 aa10.6□□□□□ -0.71
SMC4-213ENST00000472282 KLF18A0A0U1RQI7 1052 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 ASB14A6NK59 587 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 KIAA0355O15063 1070 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 CDK7P50613 346 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 ALDH5A1P51649 535 aaPredicted RBP10.59□□□□□ -0.71
SMC4-213ENST00000472282 NKX3-2P78367 333 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 APOBRQ0VD83 1088 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 GNASQ5JWF2 1037 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 APOA5Q6Q788 366 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 ANKRD33Q7Z3H0 272 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 TLK2Q86UE8 772 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 MICU3Q86XE3 530 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 MORC4Q8TE76 937 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 TBC1D5Q92609 795 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 BRF1Q92994 677 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 IL17RAQ96F46 866 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 MTMR10Q9NXD2 777 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 MAD2L2Q9UI95 211 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 BRPF3Q9ULD4 1205 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 SLC12A7Q9Y666 1083 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 SCN10AQ9Y5Y9 1956 aa10.59□□□□□ -0.71
SMC4-213ENST00000472282 GRIN2DO15399 1336 aa10.58□□□□□ -0.71
SMC4-213ENST00000472282 TRIP12Q14669 1992 aaPredicted RBP10.58□□□□□ -0.72
SMC4-213ENST00000472282 TANC1Q9C0D5 1861 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 PTPDC1A2A3K4 754 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 KLRF2D3W0D1 207 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 DYNC1LI2O43237 492 aaPredicted RBP10.58□□□□□ -0.72
SMC4-213ENST00000472282 CALML3P27482 149 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 RBM25P49756 843 aaKnown RBP10.58□□□□□ -0.72
SMC4-213ENST00000472282 TOB2Q14106 344 aaPredicted RBP10.58□□□□□ -0.72
SMC4-213ENST00000472282 USH1GQ495M9 461 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 CXCL17Q6UXB2 119 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 NOL8Q76FK4 1167 aaKnown RBP10.58□□□□□ -0.72
SMC4-213ENST00000472282 FAM126BQ8IXS8 530 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 PCSK9Q8NBP7 692 aaKnown RBP10.58□□□□□ -0.72
SMC4-213ENST00000472282 CTCFLQ8NI51 663 aaPredicted RBP10.58□□□□□ -0.72
SMC4-213ENST00000472282 GLT1D1Q96MS3 346 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 FAM161BQ96MY7 647 aa10.58□□□□□ -0.72
SMC4-213ENST00000472282 TOX2Q96NM4 488 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms