RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 COASYQ13057 564 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 SPA17Q15506 151 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 TEX35Q5T0J7 233 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 KIAA1328Q86T90 577 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 SIAH1Q8IUQ4 282 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 NUDT12Q9BQG2 462 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 GBP3Q9H0R5 595 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 VPS33BQ9H267 617 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 NHEJ1Q9H9Q4 299 aaPredicted RBP11.8□□□□□ -0.52
APLF-204ENST00000471727 ARHGEF10LQ9HCE6 1279 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 ARFGAP3Q9NP61 516 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 FAM184BQ9ULE4 1060 aa11.8□□□□□ -0.52
APLF-204ENST00000471727 ANO9A1A5B4 782 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 CTAGE15A4D2H0 777 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L15C9J2P7 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L13C9JLJ4 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L11C9JVI0 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L18D6R9N7 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L22D6RA61 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L17D6RBQ6 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L19D6RCP7 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L20D6RJB6 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 PIK3CDO00329 1044 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 ERLIN1O75477 346 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 NDUFB10O96000 172 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 CTAGE8P0CG41 777 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L24Q0WX57 530 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 ZCWPW2Q504Y3 356 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 USP17L6PQ6QN14 398 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 LRRC55Q6ZSA7 311 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 KCNK18Q7Z418 384 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 CTAGE6Q86UF2 777 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 CTAGE4Q8IX94 777 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 HNRNPLLQ8WVV9 542 aaKnown RBP11.79□□□□□ -0.52
APLF-204ENST00000471727 CCDC42Q96M95 316 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
APLF-204ENST00000471727 KCNQ5Q9NR82 932 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 HDAC9Q9UKV0 1011 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 MYO6Q9UM54 1294 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 KIAA1024Q9UPX6 916 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 DNM3Q9UQ16 869 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 SIK3Q9Y2K2 1263 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
APLF-204ENST00000471727 COL11A2P13942 1736 aaPredicted RBP11.79□□□□□ -0.52
APLF-204ENST00000471727 FRMD3A2A2Y4 597 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 RASSF10A6NK89 507 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 RAD21O60216 631 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 PLA2G6O60733 806 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 MUTP22033 750 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 MCM3P25205 808 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 RPA1P27694 616 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 KIF5AQ12840 1032 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 IKQ13123 557 aaPredicted RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 EDRF1Q3B7T1 1238 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 CCDC122Q5T0U0 273 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 FKBP1CQ5VVH2 108 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 PAPD7Q5XG87 772 aaKnown RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 MSANTD4Q8NCY6 345 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 NEK11Q8NG66 645 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 ETNPPLQ8TBG4 499 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 SYN2Q92777 582 aaPredicted RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 JAKMIP2Q96AA8 810 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 EHMT1Q9H9B1 1298 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 AGPAT5Q9NUQ2 364 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 ZNF446Q9NWS9 450 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 REXO2Q9Y3B8 237 aaKnown RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 SSU72P8A0A1W2PR75 194 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 LCA5LO95447 670 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 CYP11B2P19099 503 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 VAV2P52735 878 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 CACNB3P54284 484 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 HERVK_113P62684 666 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 AMPD2Q01433 879 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 CKAP4Q07065 602 aaKnown RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 ECM1Q16610 540 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 AOC3Q16853 763 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 GPBP1Q86WP2 473 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 ZC3H3Q8IXZ2 948 aaKnown RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 RTKN2Q8IZC4 609 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 MSL3Q8N5Y2 521 aaKnown RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 SYT2Q8N9I0 419 aaPredicted RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 CHURC1Q8WUH1 139 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 FAM151AQ8WW52 585 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 CSRNP1Q96S65 589 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 PARD6BQ9BYG5 372 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 SH2D4AQ9H788 454 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 TDRD3Q9H7E2 651 aaKnown RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 GOPCQ9HD26 462 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 LUC7LQ9NQ29 371 aaKnown RBP11.78□□□□□ -0.52
APLF-204ENST00000471727 RAB21Q9UL25 225 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 GUCA1BQ9UMX6 200 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 FHOD1Q9Y613 1164 aa11.78□□□□□ -0.52
APLF-204ENST00000471727 MYH4Q9Y623 1939 aa11.77□□□□□ -0.53
APLF-204ENST00000471727 TRAF5O00463 557 aa11.77□□□□□ -0.53
APLF-204ENST00000471727 PPIP5K2O43314 1243 aa11.77□□□□□ -0.53
APLF-204ENST00000471727 TBC1D12O60347 775 aa11.77□□□□□ -0.53
APLF-204ENST00000471727 GH2P01242 217 aa11.77□□□□□ -0.53
APLF-204ENST00000471727 SSBP05455 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms