RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TOPBP1Q92547 1522 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 RALGAPBQ86X10 1494 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ZNF75DP51815 510 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 WHAMMP3Q1A5X7 153 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 PHLDB3Q6NSJ2 640 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CLIC6Q96NY7 704 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 F5H423 210 aaPredicted RBP14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CFLARO15519 480 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 DARS2Q6PI48 645 aaKnown RBP14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SCN4BQ8IWT1 228 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SLC10A4Q96EP9 437 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 PRXQ9BXM0 1461 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 RPSAP08865 295 aaKnown RBP14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 OR52Z1P0C646 297 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 MAPK4P31152 587 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CXCR5P32302 372 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 FASTKD5Q7L8L6 764 aaKnown RBP14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 PRKCQQ04759 706 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SMC5Q8IY18 1101 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 OR8K1Q8NGG5 319 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 RASGRP4Q8TDF6 673 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SNX21Q969T3 373 aa14.33□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 DDIT3P35638 169 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CCDC157Q569K6 752 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TRIM67Q6ZTA4 783 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 HSPH1Q92598 858 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 MCF2LO15068 1137 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ATP2B4P23634 1241 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 FRA10AC1Q70Z53 315 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 NUDCD3Q8IVD9 361 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 FBXL13Q8NEE6 735 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 HEXIM2Q96MH2 286 aaKnown RBP14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 NINQ8N4C6 2090 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 RASIP1Q5U651 963 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SIX6OS1Q8N1H7 587 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TRIM58Q8NG06 486 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 GOLGA5Q8TBA6 731 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TLK1Q9UKI8 766 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 DCAF4L1Q3SXM0 396 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TMEM247A6NEH6 219 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SMAD1Q15797 465 aaKnown RBP14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 MIS18BP1Q6P0N0 1132 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 NLRP9Q7RTR0 991 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 RECQLP46063 649 aaPredicted RBP14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TRIP13Q15645 432 aaPredicted RBP14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 PTPN21Q16825 1174 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 EFCAB13Q8IY85 973 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 IFNL3Q8IZI9 196 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 GSDMAQ96QA5 445 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 NUDCD1Q96RS6 583 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 Q9H521 79 aa14.32□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 GNGT1P63211 74 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 GUCY2DQ02846 1103 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 KIF19Q2TAC6 998 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ARHGEF18Q6ZSZ5 1173 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 OPTNQ96CV9 577 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 KRT10P13645 584 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ART3Q13508 389 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SUPT20HL1Q3ZLR7 823 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TCP11X2Q5H9J9 407 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 N4BP1O75113 896 aaKnown RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 GLE1Q53GS7 698 aaKnown RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ZMYND10O75800 440 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 PAWRQ96IZ0 340 aaKnown RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 PPEF1O14829 653 aaPredicted RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 HSPD1P10809 573 aaKnown RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ARL4AP40617 200 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 FBXW10Q5XX13 1052 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 KRT80Q6KB66 452 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 PDXDC2PQ6P474 469 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SLC17A8Q8NDX2 589 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CACTINQ8WUQ7 758 aaKnown RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ADD3Q9UEY8 706 aaKnown RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SBNO1A3KN83 1393 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 MYL1P05976 194 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 LRRC41Q15345 812 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CCDC85BQ15834 202 aaPredicted RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 NACC1Q96RE7 527 aa14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 POLR3CQ9BUI4 534 aaPredicted RBP14.31□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TMTC3Q6ZXV5 915 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 STAT2P52630 851 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TRIM60Q495X7 471 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 DEPDC1BQ8WUY9 529 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 AFG1LQ8WV93 481 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 DPYSL4O14531 572 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 WBP4O75554 376 aaKnown RBP14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CNKSR1Q969H4 720 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 NT5C1BQ96P26 610 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TNKSO95271 1327 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 RPN1P04843 607 aaKnown RBP14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ZNF394Q53GI3 561 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 SMYD4Q8IYR2 804 aaPredicted RBP14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 CLCA2Q9UQC9 943 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 APOA4P06727 396 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 TMED2Q15363 201 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
NPHP3-ACAD11-201ENST00000471702 DNAJC17Q9NVM6 304 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms