RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 MFSD4AQ8N468 514 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 NKAPQ8N5F7 415 aaKnown RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 MSL3Q8N5Y2 521 aaKnown RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 ZBTB38Q8NAP3 1195 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 RBBP8NLQ8NC74 664 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 C3orf58Q8NDZ4 430 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 IL17REQ8NFR9 667 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 FEZF2Q8TBJ5 459 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 USP33Q8TEY7 942 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 RSPH1Q8WYR4 309 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 DDX1Q92499 740 aaKnown RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 DACT3Q96B18 629 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 MTMR8Q96EF0 704 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 TBATAQ96M53 351 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 CRBNQ96SW2 442 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 SMAD5Q99717 465 aaKnown RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 TARS2Q9BW92 718 aaKnown RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 SPATA9Q9BWV2 254 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 LRRC3Q9BY71 257 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 TRIM8Q9BZR9 551 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 DDX21Q9NR30 783 aaKnown RBP eCLIP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 ACAD8Q9UKU7 415 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 DGKBQ9Y6T7 804 aa3.98□□□□□ -1.77
SCN3A-207ENST00000471697 MORC2Q9Y6X9 1032 aaPredicted RBP3.98□□□□□ -1.77
SCN3A-207ENST00000471697 A0A087WZG4 1122 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 SLC22A31A6NKX4 558 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 PRR33A8MZF0 331 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 H3BS24 57 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 GABRDO14764 452 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 ADCY3O60266 1144 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 SNX2O60749 519 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 MTA2O94776 668 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 RHOBTB3O94955 611 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 TNFRSF1AP19438 455 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 ANP32AP39687 249 aaKnown RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 CCT5P48643 541 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 MMP14P50281 582 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 ZXDAP98168 799 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 FAM160A1Q05DH4 1040 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 TBX2Q13207 712 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 BIRC3Q13489 604 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 CAMK2GQ13555 558 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 TOMM20Q15388 145 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 TAF11Q15544 211 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 CCDC92Q53HC0 331 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 RALGPS1Q5JS13 557 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 CDKAL1Q5VV42 579 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 TSHZ3Q63HK5 1081 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 HHIPL2Q6UWX4 724 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 FAM196AQ6ZSG2 479 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 FRMD5Q7Z6J6 570 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 LRRTM3Q86VH5 581 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 LILRA2Q8N149 483 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 KIAA1958Q8N8K9 716 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 GOLM1Q8NBJ4 401 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 KISS1RQ969F8 398 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 PGBD4Q96DM1 585 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 NCOA5Q9HCD5 579 aaKnown RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 NLRC4Q9NPP4 1024 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 LUC7LQ9NQ29 371 aaKnown RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 INTS7Q9NVH2 962 aaKnown RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 KLHL11Q9NVR0 708 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 GPN3Q9UHW5 284 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 FEZ2Q9UHY8 353 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 PNMA8BQ9ULN7 279 aaPredicted RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 PHTF1Q9UMS5 762 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 LUC7L2Q9Y383 392 aaKnown RBP3.97□□□□□ -1.77
SCN3A-207ENST00000471697 CAPN6Q9Y6Q1 641 aa3.97□□□□□ -1.77
SCN3A-207ENST00000471697 ABHD14A-ACY1A0A1B0GW23 586 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 FAM83GA6ND36 823 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 BRINP1O60477 761 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 FBXO24O75426 580 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 PAGE1O75459 146 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 DDAH1O94760 285 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 FBXO21O94952 628 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 SLC5A1P13866 664 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 LMNB1P20700 586 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 TNFAIP3P21580 790 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 RXRGP48443 463 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 PLP2Q04941 152 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 PDE1CQ14123 709 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-207ENST00000471697 STAT4Q14765 748 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 DHCR24Q15392 516 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 ELF2Q15723 593 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 SEZ6Q53EL9 994 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 RASIP1Q5U651 963 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 SYDE2Q5VT97 1194 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 ARMC3Q5W041 872 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 C1orf228Q6PIY5 440 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 TMPRSS7Q7RTY8 843 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 ZNF605Q86T29 641 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 TPH2Q8IWU9 490 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 FAM178BQ8IXR5 827 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 AHI1Q8N157 1196 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 NKAIN3Q8N8D7 197 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 GRIN3AQ8TCU5 1115 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 FRS2Q8WU20 508 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 GOLGA1Q92805 767 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 TTC17Q96AE7 1141 aa3.96□□□□□ -1.78
SCN3A-207ENST00000471697 CDK5RAP3Q96JB5 506 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms