RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SEPT2Q15019 361 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 SLFN13Q68D06 897 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 UNC13DQ70J99 1090 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 KIAA0895Q8NCT3 520 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 SUPT20HQ8NEM7 779 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 RASSF8Q8NHQ8 419 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 NOC3LQ8WTT2 800 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 P2RX5Q93086 422 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 CALML4Q96GE6 196 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 ERO1AQ96HE7 468 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 ABHD8Q96I13 439 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 P2RX7Q99572 595 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 NUDT12Q9BQG2 462 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 GTPBP4Q9BZE4 634 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 GLT8D2Q9H1C3 349 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 VPS33BQ9H267 617 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 WBP1LQ9NX94 342 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 TAB2Q9NYJ8 693 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 LRWD1Q9UFC0 647 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 ZNF215Q9UL58 517 aaPredicted RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 SYNPO2Q9UMS6 1093 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MAPK8IP1Q9UQF2 711 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 LTBP3Q9NS15 1303 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 PVALEFA0A1B0GWK0 134 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 SOWAHDA6NJG2 315 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 RNF225M0QZC1 329 aaPredicted RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 MEIS2O14770 477 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 PSMA7O14818 248 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 N4BP3O15049 544 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 SLC26A4O43511 780 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 NDUFB10O96000 172 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 FCER1AP12319 257 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 HOXA7P31268 230 aaPredicted RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 CASP14P31944 242 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 SLC1A4P43007 532 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 AMPD3Q01432 767 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 ICA1Q05084 483 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 PDE4DQ08499 809 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 AP3B2Q13367 1082 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 STIM1Q13586 685 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 NAA30Q147X3 362 aaPredicted RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 CDC37Q16543 378 aaPredicted RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 ECM1Q16610 540 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 TMEM266Q2M3C6 531 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 ABCB5Q2M3G0 1257 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 CENPPQ6IPU0 288 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 FOXR2Q6PJQ5 311 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MOXD1Q6UVY6 613 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 BTNL9Q6UXG8 535 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 KCNK18Q7Z418 384 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 PPFIBP1Q86W92 1011 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 CNGA4Q8IV77 575 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 RTKN2Q8IZC4 609 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MB21D1Q8N884 522 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 LARP4BQ92615 738 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 RAD54LQ92698 747 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 KIFC2Q96AC6 838 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 PRMT6Q96LA8 375 aaPredicted RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 GMLQ99445 158 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 NAP1L4Q99733 375 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 ADAM33Q9BZ11 813 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 VPS16Q9H269 839 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 TDRD3Q9H7E2 651 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 PSTPIP2Q9H939 334 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MRPL44Q9H9J2 332 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 KCNMB3Q9NPA1 279 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 ABHD10Q9NUJ1 306 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 EXOC1Q9NV70 894 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 DDX25Q9UHL0 483 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.18□□□□□ -1.262e-13■■■■■ 30
SPEN-204ENST00000471538 ADGRG1Q9Y653 693 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 PDE4DIPQ5VU43 2346 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 A0A1W2PRG0 241 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L15C9J2P7 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L13C9JLJ4 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L11C9JVI0 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L18D6R9N7 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L22D6RA61 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L17D6RBQ6 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L19D6RCP7 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L20D6RJB6 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 F5H6K3 240 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 OPLAHO14841 1288 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 PPIP5K2O43314 1243 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 EVI5O60447 810 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 DDNO94850 711 aaPredicted RBP7.17□□□□□ -1.26
SPEN-204ENST00000471538 GDF11O95390 407 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 CTCFP49711 727 aaPredicted RBP7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP11P51784 963 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 RBM5P52756 815 aaKnown RBP eCLIP7.17□□□□□ -1.26
SPEN-204ENST00000471538 ERVK-24P63145 666 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 ASIC1P78348 528 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 ATP2B2Q01814 1243 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 KLRC3Q07444 240 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L24Q0WX57 530 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 MCM6Q14566 821 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 ANKRD40Q6AI12 368 aa7.17□□□□□ -1.26
SPEN-204ENST00000471538 RSBN1LQ6PCB5 846 aaPredicted RBP7.17□□□□□ -1.26
SPEN-204ENST00000471538 USP17L6PQ6QN14 398 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms