RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 AGRPO00253 132 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 DDX3XO00571 662 aaKnown RBP eCLIP3.32□□□□□ -1.88
COMMD3-209ENST00000471350 MAFKO60675 156 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 COL6A1P12109 1028 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 ACVRL1P37023 503 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 STAT5AP42229 794 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 KCNJ6P48051 423 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 HDLBPQ00341 1268 aaKnown RBP3.32□□□□□ -1.88
COMMD3-209ENST00000471350 ICAM4Q14773 271 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 SURF1Q15526 300 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 SV2CQ496J9 727 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 DENND5AQ6IQ26 1287 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 CRIP3Q6Q6R5 217 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 CEP68Q76N32 757 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 SPRED1Q7Z699 444 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 PLEKHH3Q7Z736 793 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 RIOX2Q8IUF8 465 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 CHST13Q8NET6 341 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 ZCCHC14Q8WYQ9 949 aaKnown RBP3.32□□□□□ -1.88
COMMD3-209ENST00000471350 DVL3Q92997 716 aaPredicted RBP3.32□□□□□ -1.88
COMMD3-209ENST00000471350 LOXL4Q96JB6 756 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 CHAMP1Q96JM3 812 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 YTHDC1Q96MU7 727 aaKnown RBP3.32□□□□□ -1.88
COMMD3-209ENST00000471350 SORCS2Q96PQ0 1159 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 NKX2-4Q9H2Z4 354 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 CDIP1Q9H305 208 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 ACTR10Q9NZ32 417 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 R3HCC1Q9Y3T6 440 aaKnown RBP3.32□□□□□ -1.88
COMMD3-209ENST00000471350 ZNF536O15090 1300 aa3.32□□□□□ -1.88
COMMD3-209ENST00000471350 C9orf118A6NHY6 69 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 MEFVO15553 781 aaPredicted RBP3.31□□□□□ -1.88
COMMD3-209ENST00000471350 SNRPB2P08579 225 aaKnown RBP3.31□□□□□ -1.88
COMMD3-209ENST00000471350 ECI1P42126 302 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 MLLT6P55198 1093 aaPredicted RBP3.31□□□□□ -1.88
COMMD3-209ENST00000471350 FXNQ16595 210 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 PRAMEF18Q5VWM3 479 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 LARP1BQ659C4 914 aaKnown RBP3.31□□□□□ -1.88
COMMD3-209ENST00000471350 PROSER1Q86XN7 944 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 FAM178BQ8IXR5 827 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 C1orf159Q96HA4 380 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 LCORQ96JN0 433 aaPredicted RBP3.31□□□□□ -1.88
COMMD3-209ENST00000471350 CLIC6Q96NY7 704 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 WRNIP1Q96S55 665 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 TSC22D4Q9Y3Q8 395 aa3.31□□□□□ -1.88
COMMD3-209ENST00000471350 H7BY64 318 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 HGSO14964 777 aaPredicted RBP3.3□□□□□ -1.88
COMMD3-209ENST00000471350 TADA3O75528 432 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 DGKIO75912 1065 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 DDAH1O94760 285 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 LRG1P02750 347 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 CYP1A1P04798 512 aaPredicted RBP3.3□□□□□ -1.88
COMMD3-209ENST00000471350 SCG5P05408 212 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 ATF4P18848 351 aaPredicted RBP3.3□□□□□ -1.88
COMMD3-209ENST00000471350 LTBRP36941 435 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 BCL6P41182 706 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 EPHB4P54760 987 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 SF1Q15637 639 aaKnown RBP3.3□□□□□ -1.88
COMMD3-209ENST00000471350 EMC4Q5J8M3 183 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 GLB1LQ6UWU2 654 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 ARRDC4Q8NCT1 418 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 RCBTB1Q8NDN9 531 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 TOE1Q96GM8 510 aaKnown RBP3.3□□□□□ -1.88
COMMD3-209ENST00000471350 PTPN18Q99952 460 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 MEGF9Q9H1U4 602 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 ACBD3Q9H3P7 528 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 L2HGDHQ9H9P8 463 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 ZNF652Q9Y2D9 606 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 NUB1Q9Y5A7 615 aa3.3□□□□□ -1.88
COMMD3-209ENST00000471350 TCRBV5S2A0A599 114 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 PATE3B3GLJ2 98 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 KRIT1O00522 736 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 SMAD7O15105 426 aaKnown RBP3.29□□□□□ -1.88
COMMD3-209ENST00000471350 SUV39H1O43463 412 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 LAMTOR5O43504 91 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 FSHBP01225 129 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 ITGAVP06756 1048 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 C6P13671 934 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 TACR2P21452 398 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 LSAMPQ13449 338 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 PRSS53Q2L4Q9 553 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 ACBD5Q5T8D3 534 aaPredicted RBP3.29□□□□□ -1.88
COMMD3-209ENST00000471350 STEAP3Q658P3 488 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 C6orf15Q6UXA7 325 aaPredicted RBP3.29□□□□□ -1.88
COMMD3-209ENST00000471350 EEPD1Q7L9B9 569 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 TRIM48Q8IWZ4 208 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 PPIL6Q8IXY8 311 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 IGDCC4Q8TDY8 1250 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 SH3RF3Q8TEJ3 882 aaPredicted RBP3.29□□□□□ -1.88
COMMD3-209ENST00000471350 BTN2A2Q8WVV5 523 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 TMEM209Q96SK2 561 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 ZNF747Q9BV97 191 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 TMEM168Q9H0V1 697 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 EPN3Q9H201 632 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 HSPBP1Q9NZL4 362 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 PCDHB4Q9Y5E5 795 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 PCDHA2Q9Y5H9 948 aa3.29□□□□□ -1.88
COMMD3-209ENST00000471350 SUSD5O60279 629 aa3.28□□□□□ -1.88
COMMD3-209ENST00000471350 LCP1P13796 627 aa3.28□□□□□ -1.88
COMMD3-209ENST00000471350 ERCC5P28715 1186 aaPredicted RBP3.28□□□□□ -1.88
COMMD3-209ENST00000471350 IL13P35225 146 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms