RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TMEM265A0A087WTH1 108 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 ARVCFO00192 962 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 SYPP08247 313 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 PLS3P13797 630 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 TPP2P29144 1249 aaPredicted RBP7.67□□□□□ -1.18
CKS1B-204ENST00000471245 NEK4P51957 841 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 IFI16Q16666 785 aaKnown RBP7.67□□□□□ -1.18
CKS1B-204ENST00000471245 CDKAL1Q5VV42 579 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 ZCCHC8Q6NZY4 707 aaKnown RBP7.67□□□□□ -1.18
CKS1B-204ENST00000471245 KCNT2Q6UVM3 1135 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 UBE2R2Q712K3 238 aaPredicted RBP7.67□□□□□ -1.18
CKS1B-204ENST00000471245 TMPRSS7Q7RTY8 843 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 MTDHQ86UE4 582 aaKnown RBP7.67□□□□□ -1.18
CKS1B-204ENST00000471245 FERMT3Q86UX7 667 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 HSPA12BQ96MM6 686 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 MMP19Q99542 508 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 LRRC4CQ9HCJ2 640 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 VAV3Q9UKW4 847 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 CASKIN1Q8WXD9 1431 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 KIAA1107Q9UPP5 1409 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 PLEKHH2Q8IVE3 1493 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 KDM5DQ9BY66 1539 aa7.67□□□□□ -1.18
CKS1B-204ENST00000471245 H3BS24 57 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 FGF10O15520 208 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-204ENST00000471245 EYA4O95677 639 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 S100BP04271 92 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-204ENST00000471245 GSTM1P09488 218 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 JMJD7P0C870 316 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 RBM10P98175 930 aaKnown RBP7.66□□□□□ -1.18
CKS1B-204ENST00000471245 EXOSC10Q01780 885 aaKnown RBP7.66□□□□□ -1.18
CKS1B-204ENST00000471245 GUCY1A3Q02108 690 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 PKN3Q6P5Z2 889 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 CYP2R1Q6VVX0 501 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 CCDC103Q8IW40 242 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 STK11IPQ8N1F8 1099 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 LEO1Q8WVC0 666 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-204ENST00000471245 DIO2Q92813 273 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 MTFR1LQ9H019 292 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 SEMA3GQ9NS98 782 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 CLEC1BQ9P126 229 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 DUSP13Q9UII6 198 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 TMEFF2Q9UIK5 374 aaPredicted RBP7.66□□□□□ -1.18
CKS1B-204ENST00000471245 PLAGL2Q9UPG8 496 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 NLRP1Q9C000 1473 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 FAM135AQ9P2D6 1515 aa7.66□□□□□ -1.18
CKS1B-204ENST00000471245 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 SSU72P8A0A1W2PR75 194 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 PAMP19021 973 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 SSTR4P31391 388 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 PRKCQQ04759 706 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 PCBP1Q15365 356 aaKnown RBP eCLIP7.65□□□□□ -1.18
CKS1B-204ENST00000471245 CFAP100Q494V2 611 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 LBX2Q6XYB7 198 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 CFAP65Q6ZU64 1925 aaKnown RBP7.65□□□□□ -1.18
CKS1B-204ENST00000471245 KIF18BQ86Y91 864 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 UBR1Q8IWV7 1749 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 UBE2FQ969M7 185 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 PTCHD1Q96NR3 888 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 CEP89Q96ST8 783 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 KRTAP9-9Q9BYP9 154 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 KRTAP9-4Q9BYQ2 154 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 PITPNM2Q9BZ72 1349 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 FOXP3Q9BZS1 431 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 PCMTD2Q9NV79 361 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 ZSWIM5Q9P217 1185 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 PCDHA9Q9Y5H5 950 aa7.65□□□□□ -1.18
CKS1B-204ENST00000471245 ROBO1Q9Y6N7 1651 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 NPHP3-ACAD11A0A0J9YXS1 232 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 ARNTLO00327 626 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 MARCH6O60337 910 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 KPNA6O60684 536 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 LTKP29376 864 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 SEPT7Q16181 437 aaKnown RBP7.64□□□□□ -1.19
CKS1B-204ENST00000471245 KIZQ2M2Z5 673 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 CDCA2Q69YH5 1023 aaPredicted RBP7.64□□□□□ -1.19
CKS1B-204ENST00000471245 NECAB2Q7Z6G3 386 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 STRA8Q7Z7C7 330 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 DDX53Q86TM3 631 aaKnown RBP7.64□□□□□ -1.19
CKS1B-204ENST00000471245 THEMISQ8N1K5 641 aaPredicted RBP7.64□□□□□ -1.19
CKS1B-204ENST00000471245 ATL2Q8NHH9 583 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 ALG1Q9BT22 464 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 ZFP64Q9NPA5 681 aa7.64□□□□□ -1.19
CKS1B-204ENST00000471245 FYCO1Q9BQS8 1478 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 MIA2Q96PC5 1412 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 WASH4PA8MWX3 477 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 WNT9AO14904 365 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 BRINP1O60477 761 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 KCNA6P17658 529 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 BRDTQ58F21 947 aaPredicted RBP7.63□□□□□ -1.19
CKS1B-204ENST00000471245 PLD6Q8N2A8 252 aaKnown RBP7.63□□□□□ -1.19
CKS1B-204ENST00000471245 CDADC1Q9BWV3 514 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 AP5S1Q9NUS5 200 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 PCDHA8Q9Y5H6 950 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 PCDHA11Q9Y5I1 949 aa7.63□□□□□ -1.19
CKS1B-204ENST00000471245 TMEM82A0PJX8 343 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 MSCO60682 206 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 WNT11O96014 354 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 TEKQ02763 1124 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 STRN3Q13033 797 aa7.62□□□□□ -1.19
CKS1B-204ENST00000471245 PAK1Q13153 545 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms