RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 LRP10Q7Z4F1 713 aa8.67□□□□□ -1.02
PTP4A1-202ENST00000470661 NBPF5PQ86XG9 351 aaPredicted RBP8.67□□□□□ -1.02
PTP4A1-202ENST00000470661 PNISRQ8TF01 805 aaKnown RBP8.67□□□□□ -1.02
PTP4A1-202ENST00000470661 ATG4CQ96DT6 458 aa8.67□□□□□ -1.02
PTP4A1-202ENST00000470661 PITPNM2Q9BZ72 1349 aa8.67□□□□□ -1.02
PTP4A1-202ENST00000470661 PPT2Q9UMR5 302 aa8.67□□□□□ -1.02
PTP4A1-202ENST00000470661 ST14Q9Y5Y6 855 aa8.67□□□□□ -1.02
PTP4A1-202ENST00000470661 LRRN2O75325 713 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 UBOX5O94941 541 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 GBP1P32455 592 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 KIR3DL1P43629 444 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 SUSD4Q5VX71 490 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 COPS6Q7L5N1 327 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 FAM9BQ8IZU0 186 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 CNBD1Q8NA66 436 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 C8orf58Q8NAV2 365 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 TMEM40Q8WWA1 233 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 TSR2Q969E8 191 aaKnown RBP8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 COX4I2Q96KJ9 171 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 KREMEN1Q96MU8 473 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 ACBD3Q9H3P7 528 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 ATP13A1Q9HD20 1204 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 KIF13BQ9NQT8 1826 aa8.66□□□□□ -1.02
PTP4A1-202ENST00000470661 UBN2Q6ZU65 1347 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 RGS13O14921 159 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 ANP32CO43423 234 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 FBXW10Q5XX13 1052 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 NLRC3Q7RTR2 1065 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 TSPYL6Q8N831 410 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 TTLL6Q8N841 843 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 AGBL5Q8NDL9 886 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 ASB11Q8WXH4 323 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 GPRASP2Q96D09 838 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 FERD3LQ96RJ6 166 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 BRIP1Q9BX63 1249 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 CNNM2Q9H8M5 875 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 NMRK2Q9NPI5 230 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 SEMA3GQ9NS98 782 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 GINM1Q9NU53 330 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 RNF181Q9P0P0 153 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 CHPF2Q9P2E5 772 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 ZNRF3Q9ULT6 936 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 KDM3BQ7LBC6 1761 aa8.65□□□□□ -1.02
PTP4A1-202ENST00000470661 ANKRD31Q8N7Z5 1873 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 MAP3K15Q6ZN16 1313 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 WASH4PA8MWX3 477 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 FUT4P22083 530 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 LMOD3Q0VAK6 560 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 ANGEL2Q5VTE6 544 aaKnown RBP8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 CDCP2Q5VXM1 449 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 CCDC81Q6ZN84 652 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 DTWD2Q8NBA8 298 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 TGIF2Q9GZN2 237 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 CCSER2Q9H7U1 834 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 PRDM7Q9NQW5 492 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 ZSWIM5Q9P217 1185 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 ADGRE2Q9UHX3 823 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 EFR3BQ9Y2G0 817 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 CEP350Q5VT06 3117 aa8.64□□□□□ -1.03
PTP4A1-202ENST00000470661 ABCC12Q96J65 1359 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 FAM86C2PA6NEL3 165 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 MEIS3P2A8K0S8 358 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 ZNF853P0CG23 659 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 SRGNP10124 158 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 TCF3P15923 654 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 PDE6BP35913 854 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 IRAK1P51617 712 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 CHMP4BP1P59074 171 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 C1QTNF8P60827 252 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 ST5P78524 1137 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 UBE2FQ969M7 185 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 PHAXQ9H814 394 aaKnown RBP8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 ADAMTS6Q9UKP5 1117 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 SLX4Q8IY92 1834 aa8.63□□□□□ -1.03
PTP4A1-202ENST00000470661 BRCA1P38398 1863 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 NME1P15531 152 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 ERCC5P28715 1186 aaPredicted RBP8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 LRRFIP1Q32MZ4 808 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 ZNF792Q3KQV3 632 aa8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 CLEC4GQ6UXB4 293 aa8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 PIWIL2Q8TC59 973 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 ASPNQ9BXN1 380 aa8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 ZNF652Q9Y2D9 606 aa8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 NRXN2Q9P2S2 1712 aa8.62□□□□□ -1.03
PTP4A1-202ENST00000470661 ADCY9O60503 1353 aa8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 ERVV-1B6SEH8 477 aa8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 ZP2Q05996 745 aa8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 G2E3Q7L622 706 aa8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 MASTLQ96GX5 879 aa8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 ZNF512BQ96KM6 892 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 SLC9A7Q96T83 725 aa8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 DUSP15Q9H1R2 295 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 CARS2Q9HA77 564 aaKnown RBP8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 DDX21Q9NR30 783 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 ZNF277Q9NRM2 450 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 MBNL3Q9NUK0 354 aaKnown RBP8.61□□□□□ -1.03
PTP4A1-202ENST00000470661 INPP5FQ9Y2H2 1132 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms