RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 TTLL6Q8N841 843 aa6.22□□□□□ -1.41
ITGA6-209ENST00000470259 C1orf159Q96HA4 380 aa6.22□□□□□ -1.41
ITGA6-209ENST00000470259 EPB41L1Q9H4G0 881 aa6.22□□□□□ -1.41
ITGA6-209ENST00000470259 U2SURPO15042 1029 aaKnown RBP6.21□□□□□ -1.42
ITGA6-209ENST00000470259 PRODHO43272 600 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 KLF4O43474 513 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 NOBOXO60393 691 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 STK10O94804 968 aaKnown RBP6.21□□□□□ -1.42
ITGA6-209ENST00000470259 CNR2P34972 360 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 THBS2P35442 1172 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 ITGA1P56199 1179 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 TOE1Q96GM8 510 aaKnown RBP6.21□□□□□ -1.42
ITGA6-209ENST00000470259 SGSM3Q96HU1 749 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 AARSD1Q9BTE6 412 aaKnown RBP6.21□□□□□ -1.42
ITGA6-209ENST00000470259 PHF20Q9BVI0 1012 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 ZNF652Q9Y2D9 606 aa6.21□□□□□ -1.42
ITGA6-209ENST00000470259 KRIT1O00522 736 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 DLX3O60479 287 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 MAFKO60675 156 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 RPL13P26373 211 aaKnown RBP6.2□□□□□ -1.42
ITGA6-209ENST00000470259 ZFYVE27Q5T4F4 411 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 PRAMEF18Q5VWM3 479 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 MCTP2Q6DN12 878 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 ZNF761Q86XN6 746 aaPredicted RBP6.2□□□□□ -1.42
ITGA6-209ENST00000470259 CKAP2LQ8IYA6 745 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 ARRDC4Q8NCT1 418 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 ADAMTS17Q8TE56 1095 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.2□□□□□ -1.42
ITGA6-209ENST00000470259 JAM3Q9BX67 310 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 GPR27Q9NS67 375 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 MYOTQ9UBF9 498 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 NPFFR2Q9Y5X5 522 aa6.2□□□□□ -1.42
ITGA6-209ENST00000470259 TCRBV5S2A0A599 114 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 DDX3XO00571 662 aaKnown RBP eCLIP6.19□□□□□ -1.42
ITGA6-209ENST00000470259 TADA3O75528 432 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 RAB33AQ14088 237 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 CR1LQ2VPA4 569 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 RGL3Q3MIN7 710 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 NSMFQ6X4W1 530 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 FAM124AQ86V42 546 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 ZSWIM3Q96MP5 696 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 LNPKQ9C0E8 428 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 SMOC1Q9H4F8 434 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 DTLQ9NZJ0 730 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 DUSP10Q9Y6W6 482 aa6.19□□□□□ -1.42
ITGA6-209ENST00000470259 TRAV20A0A0B4J274 112 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 MSCO60682 206 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 CAPNS1P04632 268 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 ZC3H6P61129 1189 aaKnown RBP6.18□□□□□ -1.42
ITGA6-209ENST00000470259 KIAA2012Q0VF49 1180 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 NAALADL2Q58DX5 795 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 EMC4Q5J8M3 183 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 LRRC47Q8N1G4 583 aaKnown RBP6.18□□□□□ -1.42
ITGA6-209ENST00000470259 ST13P5Q8NFI4 369 aaPredicted RBP6.18□□□□□ -1.42
ITGA6-209ENST00000470259 DCAF4Q8WV16 495 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 CLIC6Q96NY7 704 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 KCNJ15Q99712 375 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 PODXL2Q9NZ53 605 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 PPARGC1AQ9UBK2 798 aaKnown RBP6.18□□□□□ -1.42
ITGA6-209ENST00000470259 CROTQ9UKG9 612 aa6.18□□□□□ -1.42
ITGA6-209ENST00000470259 CCDC85CA6NKD9 419 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 K7ESM1 405 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 FGFR1P11362 822 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 PABPC1P11940 636 aaKnown RBP6.17□□□□□ -1.42
ITGA6-209ENST00000470259 IFRD2Q12894 506 aaPredicted RBP6.17□□□□□ -1.42
ITGA6-209ENST00000470259 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 KCNT2Q6UVM3 1135 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 RSPO2Q6UXX9 243 aaPredicted RBP6.17□□□□□ -1.42
ITGA6-209ENST00000470259 TRIM48Q8IWZ4 208 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 PIP4K2CQ8TBX8 421 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 PHOSPHO1Q8TCT1 267 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 ARHGEF4Q9NR80 690 aa6.17□□□□□ -1.42
ITGA6-209ENST00000470259 BLACEA4D250 179 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 MROH6A6NGR9 719 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 SLC27A2O14975 620 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 CYP1A1P04798 512 aaPredicted RBP6.16□□□□□ -1.42
ITGA6-209ENST00000470259 GNAT1P11488 350 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 COL6A2P12110 1019 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 ATP2B1P20020 1258 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 GRIN1Q05586 938 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 ADAM9Q13443 819 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 BORAQ6PGQ7 559 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 TMC5Q6UXY8 1006 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 IFNL3Q8IZI9 196 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 TXNDC5Q8NBS9 432 aaKnown RBP6.16□□□□□ -1.42
ITGA6-209ENST00000470259 TANGO6Q9C0B7 1094 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 L2HGDHQ9H9P8 463 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 SLC6A20Q9NP91 592 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 IGSF5Q9NSI5 407 aa6.16□□□□□ -1.42
ITGA6-209ENST00000470259 CYP7B1O75881 506 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 LRG1P02750 347 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 GRK2P25098 689 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 GRK3P35626 688 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 SPIRE1Q08AE8 756 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 KIZQ2M2Z5 673 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 SPATS1Q496A3 300 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 FAM26FQ5R3K3 315 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 YOD1Q5VVQ6 348 aaPredicted RBP6.15□□□□□ -1.42
ITGA6-209ENST00000470259 LBX2Q6XYB7 198 aa6.15□□□□□ -1.42
ITGA6-209ENST00000470259 DPH6Q7L8W6 267 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms