RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 USP17L22D6RA61 530 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L17D6RBQ6 530 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L19D6RCP7 530 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L20D6RJB6 530 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 ECE2O60344 883 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 HOXA7P31268 230 aaPredicted RBP22.32■■□□□ 1.16
CDHR3-207ENST00000470188 HDLBPQ00341 1268 aaKnown RBP22.32■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L24Q0WX57 530 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 ECM1Q16610 540 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 USP17L6PQ6QN14 398 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 C10orf67Q8IYJ2 551 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 ABCB6Q9NP58 842 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 LCMT1Q9UIC8 334 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 FGFR1OPO95684 399 aaKnown RBP22.32■■□□□ 1.16
CDHR3-207ENST00000470188 PSMD2Q13200 908 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 CDC37Q16543 378 aaPredicted RBP22.32■■□□□ 1.16
CDHR3-207ENST00000470188 SH3BP5LQ7L8J4 393 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 HAUS4Q9H6D7 363 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 RSPH14Q9UHP6 348 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 GUCA1BQ9UMX6 200 aa22.32■■□□□ 1.16
CDHR3-207ENST00000470188 SIPA1L1O43166 1804 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 NKRFO15226 690 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDHR3-207ENST00000470188 HERVK_113P62684 666 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 KRT83P78385 493 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 LRRC63Q05C16 580 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 EHHADHQ08426 723 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 HSP90B2PQ58FF3 399 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 FIGNQ5HY92 759 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 GOLGA6L1Q8N7Z2 621 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 TRIM10Q9UDY6 481 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 A0A1W2PQJ5 194 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 CTAGE15A4D2H0 777 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 CTAGE8P0CG41 777 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 CYLC1P35663 651 aaPredicted RBP22.31■■□□□ 1.16
CDHR3-207ENST00000470188 SEPT2Q15019 361 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 VWA3BQ502W6 1294 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 CTAGE6Q86UF2 777 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 CTAGE4Q8IX94 777 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 NT5C3AQ9H0P0 336 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 MED4Q9NPJ6 270 aa22.31■■□□□ 1.16
CDHR3-207ENST00000470188 KDM3AQ9Y4C1 1321 aa22.3■■□□□ 1.16
CDHR3-207ENST00000470188 ICA1Q05084 483 aa22.3■■□□□ 1.16
CDHR3-207ENST00000470188 TATDN1Q6P1N9 297 aa22.3■■□□□ 1.16
CDHR3-207ENST00000470188 IQCDQ96DY2 449 aa22.3■■□□□ 1.16
CDHR3-207ENST00000470188 ANO3Q9BYT9 981 aa22.3■■□□□ 1.16
CDHR3-207ENST00000470188 MYH7BA7E2Y1 1941 aa22.3■■□□□ 1.16
CDHR3-207ENST00000470188 H0YIN7 160 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 TRIM66O15016 1216 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 USP11P51784 963 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 CASP8Q14790 479 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 HYIQ5T013 277 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 TMEM179Q6ZVK1 233 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 NDST4Q9H3R1 872 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 NHEJ1Q9H9Q4 299 aaPredicted RBP22.29■■□□□ 1.16
CDHR3-207ENST00000470188 ABCB11O95342 1321 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 TNS1Q9HBL0 1735 aaKnown RBP22.29■■□□□ 1.16
CDHR3-207ENST00000470188 NPM3O75607 178 aaKnown RBP22.29■■□□□ 1.16
CDHR3-207ENST00000470188 COASYQ13057 564 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 LRRC41Q15345 812 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 MAN2A1Q16706 1144 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 STYK1Q6J9G0 422 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 SIAH1Q8IUQ4 282 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 CCDC170Q8IYT3 715 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 DNAJC19Q96DA6 116 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 TSG101Q99816 390 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 ZNF219Q9P2Y4 722 aaPredicted RBP22.29■■□□□ 1.16
CDHR3-207ENST00000470188 SERPINA10Q9UK55 444 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 FAN1Q9Y2M0 1017 aa22.29■■□□□ 1.16
CDHR3-207ENST00000470188 IPO7O95373 1038 aaKnown RBP22.28■■□□□ 1.16
CDHR3-207ENST00000470188 CCDC122Q5T0U0 273 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 KIAA1328Q86T90 577 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 GLIS3Q8NEA6 775 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 BMP2KQ9NSY1 1161 aaPredicted RBP22.28■■□□□ 1.16
CDHR3-207ENST00000470188 SSBP05455 408 aaKnown RBP eCLIP22.28■■□□□ 1.16
CDHR3-207ENST00000470188 WDR93Q6P2C0 686 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 ZNF662Q6ZS27 426 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 LRRC55Q6ZSA7 311 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 MYOCDQ8IZQ8 938 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 UIMC1Q96RL1 719 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 KCNMB3Q9NPA1 279 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 PANK4Q9NVE7 773 aa22.28■■□□□ 1.16
CDHR3-207ENST00000470188 GDF11O95390 407 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 VSNL1P62760 191 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 CDK17Q00537 523 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 AP3B2Q13367 1082 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 ABCB5Q2M3G0 1257 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 FOXR2Q6PJQ5 311 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 VIPAS39Q9H9C1 493 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 KIAA1024Q9UPX6 916 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 SIK3Q9Y2K2 1263 aa22.27■■□□□ 1.16
CDHR3-207ENST00000470188 CYP3A7-CYP3A51PA0A087WV96 503 aa22.26■■□□□ 1.15
CDHR3-207ENST00000470188 EIF3CLB5ME19 914 aaKnown RBP22.26■■□□□ 1.15
CDHR3-207ENST00000470188 F5H6K3 240 aa22.26■■□□□ 1.15
CDHR3-207ENST00000470188 PSMD14O00487 310 aa22.26■■□□□ 1.15
CDHR3-207ENST00000470188 CYP3A7P24462 503 aa22.26■■□□□ 1.15
CDHR3-207ENST00000470188 AMPD2Q01433 879 aa22.26■■□□□ 1.15
CDHR3-207ENST00000470188 KLRC3Q07444 240 aa22.26■■□□□ 1.15
CDHR3-207ENST00000470188 JAKMIP2Q96AA8 810 aa22.26■■□□□ 1.15
CDHR3-207ENST00000470188 EIF3CQ99613 913 aaKnown RBP22.26■■□□□ 1.15
CDHR3-207ENST00000470188 MYO6Q9UM54 1294 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms