RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ZNF652Q9Y2D9 606 aa5.92□□□□□ -1.46
BRCA2-202ENST00000470094 GNAT1P11488 350 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 IGFBP6P24592 240 aaPredicted RBP5.91□□□□□ -1.46
BRCA2-202ENST00000470094 LIMS1P48059 325 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 SPIRE1Q08AE8 756 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 PAK1Q13153 545 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 EMC4Q5J8M3 183 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 CNKSR3Q6P9H4 555 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 ETV3LQ6ZN32 361 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 CILP2Q8IUL8 1156 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 CPA5Q8WXQ8 436 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 KCNJ15Q99712 375 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 YIPF4Q9BSR8 244 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 NDOR1Q9UHB4 597 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 PCDHB4Q9Y5E5 795 aa5.91□□□□□ -1.46
BRCA2-202ENST00000470094 EFCAB14O75071 495 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 ATF2P15336 505 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 CFPP27918 469 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 MC3RP41968 323 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 FOXO4P98177 505 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 GUCY1A3Q02108 690 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 CACNB2Q08289 660 aaPredicted RBP5.9□□□□□ -1.46
BRCA2-202ENST00000470094 B3GNT8Q7Z7M8 397 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 ZC3H18Q86VM9 953 aaKnown RBP5.9□□□□□ -1.46
BRCA2-202ENST00000470094 FAM129CQ86XR2 697 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 MIB1Q86YT6 1006 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 TMEM151BQ8IW70 566 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 TMEFF1Q8IYR6 380 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 NLGN1Q8N2Q7 840 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 PIP4K2CQ8TBX8 421 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 PHOSPHO1Q8TCT1 267 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 SH3TC2Q8TF17 1288 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 DDX11Q96FC9 970 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 IRF2BPLQ9H1B7 796 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 IPPKQ9H8X2 491 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 SLC6A20Q9NP91 592 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 MYOTQ9UBF9 498 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 SFMBT1Q9UHJ3 866 aa5.9□□□□□ -1.46
BRCA2-202ENST00000470094 ARID1BQ8NFD5 2236 aaPredicted RBP5.9□□□□□ -1.47
BRCA2-202ENST00000470094 TADA3O75528 432 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 JAG1P78504 1218 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 CYP4F22Q6NT55 531 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 OTOP3Q7RTS5 596 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 PWWP2AQ96N64 755 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 MRPL4Q9BYD3 311 aaKnown RBP5.89□□□□□ -1.47
BRCA2-202ENST00000470094 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 SMOC1Q9H4F8 434 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 SLC52A2Q9HAB3 445 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 NUB1Q9Y5A7 615 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 PCDHA8Q9Y5H6 950 aa5.89□□□□□ -1.47
BRCA2-202ENST00000470094 CRTAMO95727 393 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 CYP2C8P10632 490 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 COL6A2P12110 1019 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 SQSTM1Q13501 440 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 TRIM61Q5EBN2 209 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 TCERG1LQ5VWI1 586 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 ZC3H7AQ8IWR0 971 aaKnown RBP5.88□□□□□ -1.47
BRCA2-202ENST00000470094 TRIM48Q8IWZ4 208 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 FAM126BQ8IXS8 530 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 SMARCC2Q8TAQ2 1214 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 PANK1Q8TE04 598 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 MAGEB10Q96LZ2 347 aaPredicted RBP5.88□□□□□ -1.47
BRCA2-202ENST00000470094 NCOA5Q9HCD5 579 aaKnown RBP5.88□□□□□ -1.47
BRCA2-202ENST00000470094 EPB41L4AQ9HCS5 686 aaPredicted RBP5.88□□□□□ -1.47
BRCA2-202ENST00000470094 NGRNQ9NPE2 291 aaKnown RBP5.88□□□□□ -1.47
BRCA2-202ENST00000470094 PCDHA9Q9Y5H5 950 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 PMF1-BGLAPU3KQ54 211 aa5.88□□□□□ -1.47
BRCA2-202ENST00000470094 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.87□□□□□ -1.47
BRCA2-202ENST00000470094 TCRBV5S2A0A599 114 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 ARVCFO00192 962 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 SLC27A2O14975 620 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 GSTA4O15217 222 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 SRGAP2CP0DJJ0 459 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 AFF3P51826 1226 aaKnown RBP5.87□□□□□ -1.47
BRCA2-202ENST00000470094 ST5P78524 1137 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 FZD5Q13467 585 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 CD300LDQ6UXZ3 194 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 C1QL4Q86Z23 238 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 ARRDC4Q8NCT1 418 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 GSTCDQ8NEC7 633 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 PCDH19Q8TAB3 1148 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 SLC7A14Q8TBB6 771 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 FBXW5Q969U6 566 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 DACT3Q96B18 629 aaPredicted RBP5.87□□□□□ -1.47
BRCA2-202ENST00000470094 PCDH18Q9HCL0 1135 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 ASH2LQ9UBL3 628 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 DSEQ9UL01 958 aa5.87□□□□□ -1.47
BRCA2-202ENST00000470094 WNT9AO14904 365 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 PLD2O14939 933 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 C8BP07358 591 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 ZSCAN22P10073 491 aaPredicted RBP5.86□□□□□ -1.47
BRCA2-202ENST00000470094 STAT5AP42229 794 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 NKX3-2P78367 333 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 FAM47CQ5HY64 1035 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 HABP4Q5JVS0 413 aaKnown RBP5.86□□□□□ -1.47
BRCA2-202ENST00000470094 BRAPQ7Z569 592 aa5.86□□□□□ -1.47
BRCA2-202ENST00000470094 UHMK1Q8TAS1 419 aaKnown RBP5.86□□□□□ -1.47
BRCA2-202ENST00000470094 TOE1Q96GM8 510 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms