RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 CRACR2AQ9BSW2 395 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 CABP5Q9NP86 173 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 MAST2Q6P0Q8 1798 aa10.67□□□□□ -0.7
HDAC3-205ENST00000469550 AGPSO00116 658 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 PDHXO00330 501 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 UQCRFS1P1P0C7P4 283 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 IRAK1P51617 712 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 TCP10Q12799 353 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 PPFIA1Q13136 1202 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 PAK1Q13153 545 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 RASGRF1Q13972 1273 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 WTAPQ15007 396 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 AMOTL1Q8IY63 956 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 SCYL3Q8IZE3 742 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 IFNL3Q8IZI9 196 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 STAG1Q8WVM7 1258 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 SYMPKQ92797 1274 aaKnown RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 EPSTI1Q96J88 318 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 PARK7Q99497 189 aaKnown RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 PIH1D3Q9NQM4 214 aaKnown RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 RMND1Q9NWS8 449 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 SRRDQ9UH36 339 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 CTNND2Q9UQB3 1225 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 SLC45A1Q9Y2W3 748 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 LOC285556D6RIA3 1793 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 ATXN2Q99700 1313 aaKnown RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 A0A0G2JLL6 359 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 KCNJ18B7U540 433 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 EBAG9O00559 213 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 GTPBP6O43824 516 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 BCRP11274 1271 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 CTGFP29279 349 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 ARID4AP29374 1257 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 GGCXP38435 758 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 CCT6AP40227 531 aaKnown RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 KCNJ12Q14500 433 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 E2F4Q16254 413 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 ZNF658Q5TYW1 1059 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 SPTY2D1Q68D10 685 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 GPAT2Q6NUI2 795 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 MFSD6Q6ZSS7 791 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 ZNF572Q7Z3I7 529 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 PRRT2Q7Z6L0 340 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 ZFPM1Q8IX07 1006 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 FANCBQ8NB91 859 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 OXER1Q8TDS5 423 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 MYCBPQ99417 103 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-205ENST00000469550 CHP1Q99653 195 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 SELENOOQ9BVL4 669 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 NAPBQ9H115 298 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 FAM184BQ9ULE4 1060 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 CAPN11Q9UMQ6 739 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 GUCA1BQ9UMX6 200 aa10.66□□□□□ -0.7
HDAC3-205ENST00000469550 ATAD5Q96QE3 1844 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 ERICH2A1L162 156 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 GOLGA8KD6RF30 607 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 KRT86O43790 486 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 ATP1A1P05023 1023 aaKnown RBP10.65□□□□□ -0.7
HDAC3-205ENST00000469550 EPB41P11171 864 aaKnown RBP10.65□□□□□ -0.7
HDAC3-205ENST00000469550 HOXD10P28358 340 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 MEA1Q16626 185 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 HABP4Q5JVS0 413 aaKnown RBP10.65□□□□□ -0.7
HDAC3-205ENST00000469550 RRAGBQ5VZM2 374 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 CCDC70Q6NSX1 233 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 SH3BP5LQ7L8J4 393 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 POTEDQ86YR6 584 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 MMGT1Q8N4V1 131 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 AENQ8WTP8 325 aaKnown RBP10.65□□□□□ -0.7
HDAC3-205ENST00000469550 TRIM47Q96LD4 638 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 PHF20Q9BVI0 1012 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 VPS16Q9H269 839 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 CPA4Q9UI42 421 aa10.65□□□□□ -0.7
HDAC3-205ENST00000469550 LUC7L2Q9Y383 392 aaKnown RBP10.65□□□□□ -0.7
HDAC3-205ENST00000469550 GOLGA6CA6NDK9 693 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 GOLGA6BA6NDN3 693 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 IDH1O75874 414 aaKnown RBP10.65□□□□□ -0.71
HDAC3-205ENST00000469550 ERLIN2O94905 339 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 GOLGA6DP0CG33 693 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 PRLRP16471 622 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 GNAT2P19087 354 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 OSBPP22059 807 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 EEF1GP26641 437 aaKnown RBP10.65□□□□□ -0.71
HDAC3-205ENST00000469550 CDC25AP30304 524 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 KRT2P35908 639 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 USP8P40818 1118 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 PSMC4P43686 418 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 HERVK_113P62684 666 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 TSR1Q2NL82 804 aaKnown RBP10.65□□□□□ -0.71
HDAC3-205ENST00000469550 CCDC122Q5T0U0 273 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 FASTKD5Q7L8L6 764 aaKnown RBP10.65□□□□□ -0.71
HDAC3-205ENST00000469550 DZIP1Q86YF9 867 aaKnown RBP10.65□□□□□ -0.71
HDAC3-205ENST00000469550 SMYD4Q8IYR2 804 aaPredicted RBP10.65□□□□□ -0.71
HDAC3-205ENST00000469550 CCDC170Q8IYT3 715 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 MB21D1Q8N884 522 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 RETREG2Q8NC44 543 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 JAKMIP2Q96AA8 810 aa10.65□□□□□ -0.71
HDAC3-205ENST00000469550 PURBQ96QR8 312 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms