RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 NAP1L2Q9ULW6 460 aaPredicted RBP21.02■□□□□ 0.96
PHGDH-204ENST00000469443 KAT6AQ92794 2004 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 HOXD8P13378 290 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-204ENST00000469443 CDC27P30260 824 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 ICAM3P32942 547 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 CHMP4BP1P59074 171 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 TMEM240Q5SV17 173 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 WWC2Q6AWC2 1192 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 C16orf59Q7L2K0 433 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 FBXL16Q8N461 479 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 SPATA33Q96N06 139 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 IL23AQ9NPF7 189 aa21.01■□□□□ 0.95
PHGDH-204ENST00000469443 FIBPO43427 364 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 SORBS3O60504 671 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 PPFIA4O75335 1185 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 CYP2C9P11712 490 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 METAP2P50579 478 aaKnown RBP eCLIP21■□□□□ 0.952e-6■□□□□ 10.2
PHGDH-204ENST00000469443 CCL23P55773 120 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 SMAD3P84022 425 aaKnown RBP21■□□□□ 0.95
PHGDH-204ENST00000469443 UBE2SQ16763 222 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 HSDL1Q3SXM5 330 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 PSRC1Q6PGN9 363 aaPredicted RBP21■□□□□ 0.95
PHGDH-204ENST00000469443 Q7L0L9 218 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 KATNAL1Q9BW62 490 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 AGXT2Q9BYV1 514 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 WNT8AQ9H1J5 351 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 MLXIPQ9HAP2 919 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 RTEL1Q9NZ71 1219 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 V9GY48 417 aaPredicted RBP21■□□□□ 0.95
PHGDH-204ENST00000469443 GBF1Q92538 1859 aa21■□□□□ 0.95
PHGDH-204ENST00000469443 NID2Q14112 1375 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 CCDC196A0A1B0GTZ2 297 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 SPDYE3A6NKU9 549 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 hCG_1984214I3L0E3 225 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 F2P00734 622 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 ACRP10323 421 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 PSEN2P49810 448 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 SEMA3FQ13275 785 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 FAM109BQ6ICB4 259 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-204ENST00000469443 PPP1R18Q6NYC8 613 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 SESTD1Q86VW0 696 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 ZNF713Q8N859 430 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-204ENST00000469443 USP26Q9BXU7 913 aa20.99■□□□□ 0.95
PHGDH-204ENST00000469443 SPATA31C2B4DYI2 1134 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 ZNF286BP0CG31 522 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 ADD1P35611 737 aaKnown RBP20.98■□□□□ 0.95
PHGDH-204ENST00000469443 NAPAP54920 295 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 NEDD9Q14511 834 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 TYW1BQ6NUM6 668 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 ZNF365Q70YC5 407 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 NLRX1Q86UT6 975 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 TEX2Q8IWB9 1127 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 NOD1Q9Y239 953 aa20.98■□□□□ 0.95
PHGDH-204ENST00000469443 HAS3O00219 553 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 MFSD10Q14728 455 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 PTGISQ16647 500 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 GDF6Q6KF10 455 aaPredicted RBP20.97■□□□□ 0.95
PHGDH-204ENST00000469443 TET1Q8NFU7 2136 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 SCLYQ96I15 445 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 ALG1Q9BT22 464 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 BCAS3Q9H6U6 928 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 RIC8AQ9NPQ8 531 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 MTMR10Q9NXD2 777 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 BARHL2Q9NY43 387 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 HDAC6Q9UBN7 1215 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 PCDHA6Q9UN73 950 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 PCDHA8Q9Y5H6 950 aa20.97■□□□□ 0.95
PHGDH-204ENST00000469443 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-204ENST00000469443 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-204ENST00000469443 STXBP3O00186 592 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 PITPNM1O00562 1244 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 ADCY7P51828 1080 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 KIAA0753Q2KHM9 967 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 RASIP1Q5U651 963 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 METTL7BQ6UX53 244 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 RUFY3Q7L099 469 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 RPUSD2Q8IZ73 545 aaKnown RBP20.96■□□□□ 0.95
PHGDH-204ENST00000469443 C7orf31Q8N865 590 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 GPRASP2Q96D09 838 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 SENP7Q9BQF6 1050 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 EHMT1Q9H9B1 1298 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 ZSWIM6Q9HCJ5 1215 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 GTF2IRD1Q9UHL9 959 aa20.96■□□□□ 0.95
PHGDH-204ENST00000469443 NOP56O00567 594 aaKnown RBP20.95■□□□□ 0.94
PHGDH-204ENST00000469443 FGBP02675 491 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 EVCP57679 992 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 BFSP2Q13515 415 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 ZNF697Q5TEC3 545 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 CYFIP1Q7L576 1253 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 HERVK_113Q902F9 699 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 CDHR1Q96JP9 859 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 CTAGE1Q96RT6 745 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 C16orf70Q9BSU1 422 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 TM6SF1Q9BZW5 370 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 GLT8D2Q9H1C3 349 aa20.95■□□□□ 0.94
PHGDH-204ENST00000469443 SMCO2A6NFE2 343 aa20.94■□□□□ 0.94
PHGDH-204ENST00000469443 FOSP01100 380 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-204ENST00000469443 ITGB5P18084 799 aa20.94■□□□□ 0.94
PHGDH-204ENST00000469443 PFKFB3Q16875 520 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-204ENST00000469443 CCDC155Q8N6L0 562 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms