RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 ANTXR1Q9H6X2 564 aa12.64□□□□□ -0.39
TRAIP-202ENST00000469027 NCDNQ9UBB6 729 aa12.64□□□□□ -0.39
TRAIP-202ENST00000469027 BAZ2AQ9UIF9 1905 aaKnown RBP12.63□□□□□ -0.39
TRAIP-202ENST00000469027 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.63□□□□□ -0.39
TRAIP-202ENST00000469027 RBM47A0AV96 593 aaKnown RBP12.63□□□□□ -0.39
TRAIP-202ENST00000469027 STK25O00506 426 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 PER2O15055 1255 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 ASGR2P07307 311 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 GNAI3P08754 354 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 SRGAP2BP0DMP2 458 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 FDX1P10109 184 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 DNAJB1P25685 340 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 PDE4DQ08499 809 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 TMED8Q6PL24 325 aaPredicted RBP12.63□□□□□ -0.39
TRAIP-202ENST00000469027 CHST3Q7LGC8 479 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 LCORLQ8N3X6 602 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 AFG1LQ8WV93 481 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 CLIP2Q9UDT6 1046 aa12.63□□□□□ -0.39
TRAIP-202ENST00000469027 TMEM232C9JQI7 657 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 ITGB1P05556 798 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 MMP3P08254 477 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 LINC00271P0C7V0 271 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
TRAIP-202ENST00000469027 KCNA4P22459 653 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 RFX1P22670 979 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
TRAIP-202ENST00000469027 POF1BQ8WVV4 589 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 KAT2BQ92831 832 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 CLP1Q92989 425 aaKnown RBP12.62□□□□□ -0.39
TRAIP-202ENST00000469027 CHMP4CQ96CF2 233 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 DDRGK1Q96HY6 314 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 RTKNQ9BST9 563 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 LCTP09848 1927 aa12.62□□□□□ -0.39
TRAIP-202ENST00000469027 PTPDC1A2A3K4 754 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 C2CD4DB7Z1M9 353 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 CTSHP09668 335 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 ARP10275 920 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 TECP42680 631 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 PSEN2P49810 448 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 STAT2P52630 851 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 SNAP25P60880 206 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 SLC9C2Q5TAH2 1124 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 C12orf60Q5U649 245 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 P2RX5Q93086 422 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 MPHOSPH6Q99547 160 aaKnown RBP12.61□□□□□ -0.39
TRAIP-202ENST00000469027 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 ARMT1Q9H993 441 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 FBXL21Q9UKT6 434 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
TRAIP-202ENST00000469027 FLNBO75369 2602 aaKnown RBP12.6□□□□□ -0.39
TRAIP-202ENST00000469027 MYH4Q9Y623 1939 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 PRR5-ARHGAP8B1AHC4 643 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 PRKAB2O43741 272 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 PPFIA3O75145 1194 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-202ENST00000469027 BMP3P12645 472 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 PDE6AP16499 860 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 ARHGAP8P85298 464 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 BAATQ14032 418 aaPredicted RBP12.6□□□□□ -0.39
TRAIP-202ENST00000469027 MFSD10Q14728 455 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 KIAA0753Q2KHM9 967 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 PPM1JQ5JR12 505 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 STK11IPQ8N1F8 1099 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 SPPL3Q8TCT6 385 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAIP-202ENST00000469027 TLR7Q9NYK1 1049 aaKnown RBP12.6□□□□□ -0.39
TRAIP-202ENST00000469027 CCPG1Q9ULG6 757 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
TRAIP-202ENST00000469027 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 SOBPA7XYQ1 873 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 RARSP54136 660 aaKnown RBP12.59□□□□□ -0.39
TRAIP-202ENST00000469027 LMNB2Q03252 620 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 DGKDQ16760 1214 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
TRAIP-202ENST00000469027 KLHL23Q8NBE8 558 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 VN1R2Q8NFZ6 395 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 CHURC1Q8WUH1 139 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 CCDC8Q9H0W5 538 aaPredicted RBP12.59□□□□□ -0.39
TRAIP-202ENST00000469027 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 DBNLQ9UJU6 430 aaKnown RBP12.59□□□□□ -0.39
TRAIP-202ENST00000469027 USP18Q9UMW8 372 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
TRAIP-202ENST00000469027 LOC102724159A0A0B4J2E5 919 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 KINO60870 393 aaKnown RBP12.58□□□□□ -0.4
TRAIP-202ENST00000469027 ARIH2O95376 493 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 GH1P01241 217 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 GNAI2P04899 355 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 ZNF286BP0CG31 522 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 NPR3P17342 541 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 CALML3P27482 149 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 PWP2Q15269 919 aaKnown RBP12.58□□□□□ -0.4
TRAIP-202ENST00000469027 NAALADL2Q58DX5 795 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 SLFN13Q68D06 897 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 ANKRD54Q6NXT1 300 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 LLGL2Q6P1M3 1020 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
TRAIP-202ENST00000469027 RPAP2Q8IXW5 612 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms