RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 V9GY48 417 aaPredicted RBP19.67■□□□□ 0.74
SSBP1-207ENST00000468267 UMODL1Q5DID0 1318 aa19.67■□□□□ 0.74
SSBP1-207ENST00000468267 TRIP12Q14669 1992 aaPredicted RBP19.66■□□□□ 0.74
SSBP1-207ENST00000468267 PPFIA4O75335 1185 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 GGPS1O95749 300 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 HOXD8P13378 290 aaPredicted RBP19.66■□□□□ 0.74
SSBP1-207ENST00000468267 UBA1P22314 1058 aaKnown RBP19.66■□□□□ 0.74
SSBP1-207ENST00000468267 RPS6KB1P23443 525 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 CDC27P30260 824 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 APOBRQ0VD83 1088 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 DEFB123Q8N688 67 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 BRF1Q92994 677 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.66■□□□□ 0.74
SSBP1-207ENST00000468267 USP26Q9BXU7 913 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 RTEL1Q9NZ71 1219 aa19.66■□□□□ 0.74
SSBP1-207ENST00000468267 NAP1L2Q9ULW6 460 aaPredicted RBP19.66■□□□□ 0.74
SSBP1-207ENST00000468267 DOCK5Q9H7D0 1870 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 SPATA31C2B4DYI2 1134 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 CYP2C9P11712 490 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 CHMP4BP1P59074 171 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 TMEM240Q5SV17 173 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 WWC2Q6AWC2 1192 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 FAM109BQ6ICB4 259 aaPredicted RBP19.65■□□□□ 0.74
SSBP1-207ENST00000468267 Q7L0L9 218 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 SPATA33Q96N06 139 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 AGXT2Q9BYV1 514 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 IL23AQ9NPF7 189 aa19.65■□□□□ 0.74
SSBP1-207ENST00000468267 CCDC196A0A1B0GTZ2 297 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 SORBS3O60504 671 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 ACRP10323 421 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 ADD1P35611 737 aaKnown RBP19.64■□□□□ 0.73
SSBP1-207ENST00000468267 METAP2P50579 478 aaKnown RBP eCLIP19.64■□□□□ 0.73
SSBP1-207ENST00000468267 CCL23P55773 120 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 SMAD3P84022 425 aaKnown RBP19.64■□□□□ 0.73
SSBP1-207ENST00000468267 SEMA3FQ13275 785 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 UBE2SQ16763 222 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 HSDL1Q3SXM5 330 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 SESTD1Q86VW0 696 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 WNT8AQ9H1J5 351 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 BCAS3Q9H6U6 928 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 MLXIPQ9HAP2 919 aa19.64■□□□□ 0.73
SSBP1-207ENST00000468267 FIBPO43427 364 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 F2P00734 622 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 PSEN2P49810 448 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 NAPAP54920 295 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 NEDD9Q14511 834 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 TYW1BQ6NUM6 668 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 PPP1R18Q6NYC8 613 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 PSRC1Q6PGN9 363 aaPredicted RBP19.63■□□□□ 0.73
SSBP1-207ENST00000468267 ZNF365Q70YC5 407 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 TEX2Q8IWB9 1127 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 KATNAL1Q9BW62 490 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 ZSWIM6Q9HCJ5 1215 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 RIC8AQ9NPQ8 531 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 CDH23Q9H251 3354 aa19.63■□□□□ 0.73
SSBP1-207ENST00000468267 NID2Q14112 1375 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 SPDYE3A6NKU9 549 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 hCG_1984214I3L0E3 225 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 STXBP3O00186 592 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 HAS3O00219 553 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 ZNF286BP0CG31 522 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 MFSD10Q14728 455 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 PTGISQ16647 500 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 RASIP1Q5U651 963 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 GDF6Q6KF10 455 aaPredicted RBP19.62■□□□□ 0.73
SSBP1-207ENST00000468267 RUFY3Q7L099 469 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 ZNF713Q8N859 430 aaPredicted RBP19.62■□□□□ 0.73
SSBP1-207ENST00000468267 SENP7Q9BQF6 1050 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 MTMR10Q9NXD2 777 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 BARHL2Q9NY43 387 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 PCDHA6Q9UN73 950 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 PCDHA8Q9Y5H6 950 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 SCN5AQ14524 2016 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 CHD9Q3L8U1 2897 aa19.62■□□□□ 0.73
SSBP1-207ENST00000468267 A0A0C4DFX4 3053 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 EVCP57679 992 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 KIAA0753Q2KHM9 967 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 METTL7BQ6UX53 244 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 CYFIP1Q7L576 1253 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 NLRX1Q86UT6 975 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 RPUSD2Q8IZ73 545 aaKnown RBP19.61■□□□□ 0.73
SSBP1-207ENST00000468267 C7orf31Q8N865 590 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 SCLYQ96I15 445 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 CTAGE1Q96RT6 745 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 ALG1Q9BT22 464 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 HDAC6Q9UBN7 1215 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 GTF2IRD1Q9UHL9 959 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 NOD1Q9Y239 953 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 MYO9BQ13459 2157 aa19.61■□□□□ 0.73
SSBP1-207ENST00000468267 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.6■□□□□ 0.73
SSBP1-207ENST00000468267 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.6■□□□□ 0.73
SSBP1-207ENST00000468267 PITPNM1O00562 1244 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 FGBP02675 491 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 ADCY7P51828 1080 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 BFSP2Q13515 415 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 PFKFB3Q16875 520 aaPredicted RBP19.6■□□□□ 0.73
SSBP1-207ENST00000468267 HERVK_113Q902F9 699 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 GPRASP2Q96D09 838 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 VWCEQ96DN2 955 aa19.6■□□□□ 0.73
SSBP1-207ENST00000468267 C16orf70Q9BSU1 422 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms