RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ALAS1P13196 640 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 PDE4BQ07343 736 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
VPS26A-204ENST00000467852 NAALADL2Q58DX5 795 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 AMOTL1Q8IY63 956 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 SDR42E1Q8WUS8 393 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 P2RX5Q93086 422 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 DBNDD2Q9BQY9 259 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 HDAC6Q9UBN7 1215 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 PCDHB8Q9UN66 801 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 PCDHB13Q9Y5F0 798 aa13.97□□□□□ -0.17
VPS26A-204ENST00000467852 LOC102724159A0A0B4J2E5 919 aa13.96□□□□□ -0.17
VPS26A-204ENST00000467852 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.96□□□□□ -0.17
VPS26A-204ENST00000467852 LINC00271P0C7V0 271 aa13.96□□□□□ -0.17
VPS26A-204ENST00000467852 SRGAP2BP0DMP2 458 aa13.96□□□□□ -0.17
VPS26A-204ENST00000467852 PWP2Q15269 919 aaKnown RBP13.96□□□□□ -0.17
VPS26A-204ENST00000467852 NSMFQ6X4W1 530 aa13.96□□□□□ -0.17
VPS26A-204ENST00000467852 SCFD2Q8WU76 684 aa13.96□□□□□ -0.17
VPS26A-204ENST00000467852 COPS5Q92905 334 aa13.96□□□□□ -0.17
VPS26A-204ENST00000467852 SMOC2Q9H3U7 446 aa13.96□□□□□ -0.17
VPS26A-204ENST00000467852 BAZ2AQ9UIF9 1905 aaKnown RBP13.96□□□□□ -0.18
VPS26A-204ENST00000467852 MYH4Q9Y623 1939 aa13.96□□□□□ -0.18
VPS26A-204ENST00000467852 ADGRA3Q8IWK6 1321 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 TXNP10599 105 aaKnown RBP13.95□□□□□ -0.18
VPS26A-204ENST00000467852 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
VPS26A-204ENST00000467852 THPOP40225 353 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 BTG3Q14201 252 aaPredicted RBP13.95□□□□□ -0.18
VPS26A-204ENST00000467852 C16orf86Q6ZW13 317 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 SPPL3Q8TCT6 385 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 GPR108Q9NPR9 543 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 NCDNQ9UBB6 729 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 FLNBO75369 2602 aaKnown RBP13.95□□□□□ -0.18
VPS26A-204ENST00000467852 LCTP09848 1927 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 ZFYVE26Q68DK2 2539 aa13.95□□□□□ -0.18
VPS26A-204ENST00000467852 ASPMQ8IZT6 3477 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 RBAK-RBAKDNI3L0D1 243 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 DNAJB1P25685 340 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 ALDH5A1P51649 535 aaPredicted RBP13.94□□□□□ -0.18
VPS26A-204ENST00000467852 LMNB2Q03252 620 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 TNNI3KQ59H18 835 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 MICAL1Q8TDZ2 1067 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 ATP8B4Q8TF62 1192 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 PURBQ96QR8 312 aaKnown RBP13.94□□□□□ -0.18
VPS26A-204ENST00000467852 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
VPS26A-204ENST00000467852 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 FPGT-TNNI3KV9GXZ4 949 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 MYH7BA7E2Y1 1941 aa13.94□□□□□ -0.18
VPS26A-204ENST00000467852 MAP3K13O43283 966 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 ITGB1P05556 798 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 NPR3P17342 541 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 PDE4DQ08499 809 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 MUM1L1Q5H9M0 696 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 RPAP2Q8IXW5 612 aaPredicted RBP13.93□□□□□ -0.18
VPS26A-204ENST00000467852 AFG1LQ8WV93 481 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 POF1BQ8WVV4 589 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 RIN2Q8WYP3 895 aaPredicted RBP13.93□□□□□ -0.18
VPS26A-204ENST00000467852 KAT2BQ92831 832 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 APBB2Q92870 758 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 WNT8BQ93098 351 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 CDCA3Q99618 268 aaPredicted RBP13.93□□□□□ -0.18
VPS26A-204ENST00000467852 KATNAL1Q9BW62 490 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 S1PR5Q9H228 398 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 PLSCR2Q9NRY7 297 aa13.93□□□□□ -0.18
VPS26A-204ENST00000467852 C2CD4DB7Z1M9 353 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 PER2O15055 1255 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 ASGR2P07307 311 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 MMP3P08254 477 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 MTX1Q13505 466 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 PPM1JQ5JR12 505 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 VARS2Q5ST30 1063 aaKnown RBP13.92□□□□□ -0.18
VPS26A-204ENST00000467852 C12orf60Q5U649 245 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 DHX37Q8IY37 1157 aaKnown RBP13.92□□□□□ -0.18
VPS26A-204ENST00000467852 SUMF1Q8NBK3 374 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 CHURC1Q8WUH1 139 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 SECISBP2LQ93073 1101 aaKnown RBP13.92□□□□□ -0.18
VPS26A-204ENST00000467852 KIF12Q96FN5 646 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 ATP8A2Q9NTI2 1148 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 CLIP2Q9UDT6 1046 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 ANGPTL2Q9UKU9 493 aa13.92□□□□□ -0.18
VPS26A-204ENST00000467852 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
VPS26A-204ENST00000467852 TMEM232C9JQI7 657 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 STK25O00506 426 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 TECP42680 631 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 PSEN2P49810 448 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 STAT2P52630 851 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 RBM10P98175 930 aaKnown RBP13.91□□□□□ -0.18
VPS26A-204ENST00000467852 ZNF200P98182 395 aaPredicted RBP13.91□□□□□ -0.18
VPS26A-204ENST00000467852 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
VPS26A-204ENST00000467852 ANKRD54Q6NXT1 300 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 KLHL23Q8NBE8 558 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS26A-204ENST00000467852 APOL5Q9BWW9 433 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 ANTXR1Q9H6X2 564 aa13.91□□□□□ -0.18
VPS26A-204ENST00000467852 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
VPS26A-204ENST00000467852 CYP2D7A0A087X1C5 515 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 KINO60870 393 aaKnown RBP13.9□□□□□ -0.18
VPS26A-204ENST00000467852 SP9P0CG40 484 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 BMP3P12645 472 aa13.9□□□□□ -0.18
VPS26A-204ENST00000467852 DDX10Q13206 875 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms