RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 FAM109BQ6ICB4 259 aaPredicted RBP20.86■□□□□ 0.93
CGREF1-208ENST00000467539 SESTD1Q86VW0 696 aa20.86■□□□□ 0.93
CGREF1-208ENST00000467539 GPKOWQ92917 476 aaPredicted RBP eCLIP20.86■□□□□ 0.93
CGREF1-208ENST00000467539 SPATA33Q96N06 139 aa20.86■□□□□ 0.93
CGREF1-208ENST00000467539 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.86■□□□□ 0.93
CGREF1-208ENST00000467539 MLXIPQ9HAP2 919 aa20.86■□□□□ 0.93
CGREF1-208ENST00000467539 ZSWIM6Q9HCJ5 1215 aa20.86■□□□□ 0.93
CGREF1-208ENST00000467539 SCN10AQ9Y5Y9 1956 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 hCG_1984214I3L0E3 225 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 FIBPO43427 364 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 UBA1P22314 1058 aaKnown RBP20.85■□□□□ 0.93
CGREF1-208ENST00000467539 METAP2P50579 478 aaKnown RBP eCLIP20.85■□□□□ 0.93
CGREF1-208ENST00000467539 EVCP57679 992 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 NEDD9Q14511 834 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 WWC2Q6AWC2 1192 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 RUFY3Q7L099 469 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 ZNF713Q8N859 430 aaPredicted RBP20.85■□□□□ 0.93
CGREF1-208ENST00000467539 RNPC3Q96LT9 517 aaKnown RBP20.85■□□□□ 0.93
CGREF1-208ENST00000467539 SENP7Q9BQF6 1050 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 TM6SF1Q9BZW5 370 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 BCAS3Q9H6U6 928 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 IL23AQ9NPF7 189 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 NAP1L2Q9ULW6 460 aaPredicted RBP20.85■□□□□ 0.93
CGREF1-208ENST00000467539 PCDHA6Q9UN73 950 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 PCDHA8Q9Y5H6 950 aa20.85■□□□□ 0.93
CGREF1-208ENST00000467539 UMODL1Q5DID0 1318 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 HAS3O00219 553 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 CYP2C9P11712 490 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 SMAD3P84022 425 aaKnown RBP20.84■□□□□ 0.93
CGREF1-208ENST00000467539 SEMA3FQ13275 785 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 PPP1R18Q6NYC8 613 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 NLRX1Q86UT6 975 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 DEFB123Q8N688 67 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 RIC8AQ9NPQ8 531 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 BARHL2Q9NY43 387 aa20.84■□□□□ 0.93
CGREF1-208ENST00000467539 SPDYE3A6NKU9 549 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 PSEN2P49810 448 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 NAPAP54920 295 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 CCL23P55773 120 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 CHMP4BP1P59074 171 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 UBE2SQ16763 222 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 RASIP1Q5U651 963 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 TYW1BQ6NUM6 668 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 ZNF365Q70YC5 407 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 RPUSD2Q8IZ73 545 aaKnown RBP20.83■□□□□ 0.93
CGREF1-208ENST00000467539 PPP1R13LQ8WUF5 828 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 KATNAL1Q9BW62 490 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 GLT8D2Q9H1C3 349 aa20.83■□□□□ 0.93
CGREF1-208ENST00000467539 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.82■□□□□ 0.92
CGREF1-208ENST00000467539 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.82■□□□□ 0.92
CGREF1-208ENST00000467539 SMCO2A6NFE2 343 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 STXBP3O00186 592 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 MAFGO15525 162 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 PRPF3O43395 683 aaKnown RBP20.82■□□□□ 0.92
CGREF1-208ENST00000467539 F2P00734 622 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 FOSP01100 380 aaPredicted RBP20.82■□□□□ 0.92
CGREF1-208ENST00000467539 FGBP02675 491 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 ACRP10323 421 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 PSRC1Q6PGN9 363 aaPredicted RBP20.82■□□□□ 0.92
CGREF1-208ENST00000467539 CYFIP1Q7L576 1253 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 GPRASP2Q96D09 838 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 WNT8AQ9H1J5 351 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 CYP46A1Q9Y6A2 500 aa20.82■□□□□ 0.92
CGREF1-208ENST00000467539 LAMA2P24043 3122 aaKnown RBP20.82■□□□□ 0.92
CGREF1-208ENST00000467539 MYH7BA7E2Y1 1941 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 SORBS3O60504 671 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 PDIA3P30101 505 aaKnown RBP20.81■□□□□ 0.92
CGREF1-208ENST00000467539 MFSD10Q14728 455 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 PTGISQ16647 500 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 PFKFB3Q16875 520 aaPredicted RBP20.81■□□□□ 0.92
CGREF1-208ENST00000467539 KIAA0753Q2KHM9 967 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 GDF6Q6KF10 455 aaPredicted RBP20.81■□□□□ 0.92
CGREF1-208ENST00000467539 METTL7BQ6UX53 244 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 Q7L0L9 218 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 C7orf31Q8N865 590 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 GIMAP8Q8ND71 665 aaPredicted RBP20.81■□□□□ 0.92
CGREF1-208ENST00000467539 CDHR1Q96JP9 859 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 C16orf70Q9BSU1 422 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 EHMT1Q9H9B1 1298 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 MTMR10Q9NXD2 777 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 HDAC6Q9UBN7 1215 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 GTF2IRD1Q9UHL9 959 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 UBIAD1Q9Y5Z9 338 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 NID2Q14112 1375 aa20.81■□□□□ 0.92
CGREF1-208ENST00000467539 PITPNM1O00562 1244 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 ITGB5P18084 799 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 BFSP2Q13515 415 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 NTRK3Q16288 839 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 RETREG2Q8NC44 543 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 HERVK_113Q902F9 699 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 VWCEQ96DN2 955 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 CTAGE1Q96RT6 745 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 ALG1Q9BT22 464 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 NOD1Q9Y239 953 aa20.8■□□□□ 0.92
CGREF1-208ENST00000467539 ZNF286BP0CG31 522 aa20.79■□□□□ 0.92
CGREF1-208ENST00000467539 SCG2P13521 617 aa20.79■□□□□ 0.92
CGREF1-208ENST00000467539 ADCY7P51828 1080 aa20.79■□□□□ 0.92
CGREF1-208ENST00000467539 TOB2Q14106 344 aaPredicted RBP20.79■□□□□ 0.92
CGREF1-208ENST00000467539 PKN1Q16512 942 aa20.79■□□□□ 0.92
CGREF1-208ENST00000467539 ZNF274Q96GC6 653 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms