RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 SAMD11Q96NU1 681 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 LRP2BPQ9P2M1 347 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 PRKAG3Q9UGI9 489 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 FBXL7Q9UJT9 491 aa7.11□□□□□ -1.27
PRPF40A-205ENST00000467114 HGSO14964 777 aaPredicted RBP7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 DNAJA1P31689 397 aaKnown RBP7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 LTBRP36941 435 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 ETFBP38117 255 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 GFRA1P56159 465 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 NKX3-2P78367 333 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 ADAM9Q13443 819 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 LSAMPQ13449 338 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 CHRNA2Q15822 529 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 PRSS53Q2L4Q9 553 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 MCTP2Q6DN12 878 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 MRM1Q6IN84 353 aaKnown RBP7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 DENND5AQ6IQ26 1287 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 BORAQ6PGQ7 559 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 FAM124AQ86V42 546 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 VPS37DQ86XT2 251 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 TTC9BQ8N6N2 239 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 ZNF408Q9H9D4 720 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 INVSQ9Y283 1065 aa7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 COA3Q9Y2R0 106 aaPredicted RBP7.1□□□□□ -1.27
PRPF40A-205ENST00000467114 C9orf118A6NHY6 69 aa7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 DDX3XO00571 662 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 TADA3O75528 432 aa7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 SSBP05455 408 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 PUM1Q14671 1186 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 EMC4Q5J8M3 183 aa7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 PPIL6Q8IXY8 311 aa7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 C1orf159Q96HA4 380 aa7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.09□□□□□ -1.275e-9■□□□□ 8.3
PRPF40A-205ENST00000467114 SSBP3Q9BWW4 388 aaPredicted RBP7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 C1QTNF3Q9BXJ4 246 aa7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 DTLQ9NZJ0 730 aa7.09□□□□□ -1.27
PRPF40A-205ENST00000467114 DDAH1O94760 285 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 LCP1P13796 627 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 ZNF28P17035 718 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 FXNQ16595 210 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 SLC35F1Q5T1Q4 408 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 CPZQ66K79 652 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 TMEM145Q8NBT3 493 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 ARRDC4Q8NCT1 418 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 MICAL1Q8TDZ2 1067 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 TOE1Q96GM8 510 aaKnown RBP7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 LCORQ96JN0 433 aaPredicted RBP7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 YIPF4Q9BSR8 244 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 TMPRSS5Q9H3S3 457 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 PCDHA2Q9Y5H9 948 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 NPFFR2Q9Y5X5 522 aa7.08□□□□□ -1.28
PRPF40A-205ENST00000467114 TCRBV5S2A0A599 114 aa7.07□□□□□ -1.28
PRPF40A-205ENST00000467114 KLF4O43474 513 aa7.07□□□□□ -1.28
PRPF40A-205ENST00000467114 KCNJ6P48051 423 aa7.07□□□□□ -1.28
PRPF40A-205ENST00000467114 RBL2Q08999 1139 aa7.07□□□□□ -1.28
PRPF40A-205ENST00000467114 STEAP3Q658P3 488 aa7.07□□□□□ -1.28
PRPF40A-205ENST00000467114 ARMC5Q96C12 935 aa7.07□□□□□ -1.28
PRPF40A-205ENST00000467114 EPN3Q9H201 632 aa7.07□□□□□ -1.28
PRPF40A-205ENST00000467114 C1QTNF3-AMACRE9PGA6 284 aa7.06□□□□□ -1.28
PRPF40A-205ENST00000467114 TEPPQ6URK8 271 aa7.06□□□□□ -1.28
PRPF40A-205ENST00000467114 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.06□□□□□ -1.28
PRPF40A-205ENST00000467114 LOXL4Q96JB6 756 aa7.06□□□□□ -1.28
PRPF40A-205ENST00000467114 EPB41L1Q9H4G0 881 aa7.06□□□□□ -1.28
PRPF40A-205ENST00000467114 HSPBP1Q9NZL4 362 aa7.06□□□□□ -1.28
PRPF40A-205ENST00000467114 PCDHB4Q9Y5E5 795 aa7.06□□□□□ -1.28
PRPF40A-205ENST00000467114 B4GALT3O60512 393 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 DGKIO75912 1065 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 ZNF20P17024 532 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 TNFRSF1AP19438 455 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 SURF1Q15526 300 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 PRAMEF18Q5VWM3 479 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 EEPD1Q7L9B9 569 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 PHOSPHO1Q8TCT1 267 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 CHAMP1Q96JM3 812 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 YTHDC1Q96MU7 727 aaKnown RBP7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 C8orf49Q96NF6 230 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 CLDND1Q9NY35 253 aa7.05□□□□□ -1.28
PRPF40A-205ENST00000467114 LRG1P02750 347 aa7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 IL13P35225 146 aa7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 MAP4K2Q12851 820 aa7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 SLC10A6Q3KNW5 377 aa7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 SREK1Q8WXA9 508 aaKnown RBP7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 MBD6Q96DN6 1003 aa7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 CLIC6Q96NY7 704 aa7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 TANGO6Q9C0B7 1094 aa7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 SMOC1Q9H4F8 434 aa7.04□□□□□ -1.28
PRPF40A-205ENST00000467114 ZNF536O15090 1300 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 CYP7B1O75881 506 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 GJB6O95452 261 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 GRIA2P42262 883 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 MLLT6P55198 1093 aaPredicted RBP7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 CYP4F22Q6NT55 531 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 PKN3Q6P5Z2 889 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 GLB1LQ6UWU2 654 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 TMEM209Q96SK2 561 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 MYOTQ9UBF9 498 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 WASF3Q9UPY6 502 aa7.03□□□□□ -1.28
PRPF40A-205ENST00000467114 MATN3O15232 486 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms