RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 CDKL5O76039 1030 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 SETSIPP0DME0 302 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 PLCG2P16885 1265 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 OTUD7BQ6GQQ9 843 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 APOA5Q6Q788 366 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 SPATA21Q7Z572 469 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 NCAPG2Q86XI2 1143 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 TRMT44Q8IYL2 757 aaKnown RBP17.08■□□□□ 0.33
ABCF3-206ENST00000466742 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 TRIML1Q8N9V2 468 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.33
ABCF3-206ENST00000466742 C8orf76Q96K31 380 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 CTAGE1Q96RT6 745 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 ABHD10Q9NUJ1 306 aa17.08■□□□□ 0.33
ABCF3-206ENST00000466742 REXO2Q9Y3B8 237 aaKnown RBP17.08■□□□□ 0.33
ABCF3-206ENST00000466742 SNED1Q8TER0 1413 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 CYP2D7A0A087X1C5 515 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 ANO9A1A5B4 782 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 ZNF233A6NK53 670 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 KRT14P02533 472 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 NT5C2P49902 561 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 ITGB3BPQ13352 177 aaPredicted RBP17.08■□□□□ 0.32
ABCF3-206ENST00000466742 DOK7Q18PE1 504 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 RBM12BQ8IXT5 1001 aaKnown RBP17.08■□□□□ 0.32
ABCF3-206ENST00000466742 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 CAGE1Q8TC20 777 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 CCT6BQ92526 530 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 SLC5A4Q9NY91 659 aa17.08■□□□□ 0.32
ABCF3-206ENST00000466742 NOP53Q9NZM5 478 aaKnown RBP17.08■□□□□ 0.32
ABCF3-206ENST00000466742 DMGDHQ9UI17 866 aaKnown RBP17.08■□□□□ 0.32
ABCF3-206ENST00000466742 HMGB1P1B2RPK0 211 aaPredicted RBP17.07■□□□□ 0.32
ABCF3-206ENST00000466742 SMIM22K7EJ46 135 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 ORC4O43929 436 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 BTDP43251 543 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 PLCD1P51178 756 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 C2orf54Q08AI8 447 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 ARMC9Q7Z3E5 817 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 B4GALNT2Q8NHY0 566 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 HVCN1Q96D96 273 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 SEC16BQ96JE7 1060 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 EPAS1Q99814 870 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 TRIM10Q9UDY6 481 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.07■□□□□ 0.32
ABCF3-206ENST00000466742 MYH8P13535 1937 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 B4DLN1 442 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 G3V3G9 751 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 BYSLQ13895 437 aaKnown RBP17.07■□□□□ 0.32
ABCF3-206ENST00000466742 DCAF8Q5TAQ9 597 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
ABCF3-206ENST00000466742 ATP6V1G3Q96LB4 118 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 LRRC1Q9BTT6 524 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 MCM9Q9NXL9 1143 aa17.07■□□□□ 0.32
ABCF3-206ENST00000466742 EPN1Q9Y6I3 576 aaPredicted RBP17.07■□□□□ 0.32
ABCF3-206ENST00000466742 KIF28PB7ZC32 967 aa17.06■□□□□ 0.32
ABCF3-206ENST00000466742 METAP2P50579 478 aaKnown RBP eCLIP17.06■□□□□ 0.32
ABCF3-206ENST00000466742 HIBCHQ6NVY1 386 aaPredicted RBP17.06■□□□□ 0.32
ABCF3-206ENST00000466742 GALNT15Q8N3T1 639 aa17.06■□□□□ 0.32
ABCF3-206ENST00000466742 CERS5Q8N5B7 392 aa17.06■□□□□ 0.32
ABCF3-206ENST00000466742 ARFGAP2Q8N6H7 521 aa17.06■□□□□ 0.32
ABCF3-206ENST00000466742 HDAC7Q8WUI4 952 aa17.06■□□□□ 0.32
ABCF3-206ENST00000466742 TSC22D3Q99576 134 aa17.06■□□□□ 0.32
ABCF3-206ENST00000466742 SUDS3Q9H7L9 328 aaPredicted RBP17.06■□□□□ 0.32
ABCF3-206ENST00000466742 KCNH3Q9ULD8 1083 aa17.06■□□□□ 0.32
ABCF3-206ENST00000466742 ZBTB43O43298 467 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 TRAPPC3O43617 180 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 NDUFA10O95299 355 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 RCAN1P53805 252 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 KIF23Q02241 960 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-206ENST00000466742 PTPAQ15257 358 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 C12orf60Q5U649 245 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 HHATQ5VTY9 493 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 STK11IPQ8N1F8 1099 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 ZFATQ9P243 1243 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 SLC12A7Q9Y666 1083 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 NID2Q14112 1375 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 CPLX1O14810 134 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 FOXN1O15353 648 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 LUC7L3O95232 432 aaKnown RBP17.05■□□□□ 0.32
ABCF3-206ENST00000466742 ATP4AP20648 1035 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 RHBDL3P58872 404 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 FKBP1AP62942 108 aaKnown RBP17.05■□□□□ 0.32
ABCF3-206ENST00000466742 WTAPQ15007 396 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 CFAP58Q5T655 872 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 SPATA1Q5VX52 437 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 ARHGAP22Q7Z5H3 698 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 APLFQ8IW19 511 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-206ENST00000466742 CACNA2D3Q8IZS8 1091 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 TTLL6Q8N841 843 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 FAM81AQ8TBF8 368 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 PPANQ9NQ55 473 aaKnown RBP17.05■□□□□ 0.32
ABCF3-206ENST00000466742 PCDHGA4Q9Y5G9 962 aa17.05■□□□□ 0.32
ABCF3-206ENST00000466742 PYGBP11216 843 aa17.04■□□□□ 0.32
ABCF3-206ENST00000466742 GNAT1P11488 350 aa17.04■□□□□ 0.32
ABCF3-206ENST00000466742 ALADP13716 330 aa17.04■□□□□ 0.32
ABCF3-206ENST00000466742 SDCCAG8Q86SQ7 713 aaPredicted RBP17.04■□□□□ 0.32
ABCF3-206ENST00000466742 MREGQ8N565 214 aa17.04■□□□□ 0.32
ABCF3-206ENST00000466742 TSGA10Q9BZW7 698 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms