RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 PRSS53Q2L4Q9 553 aa6.47□□□□□ -1.37
CHMP2B-202ENST00000466696 CR1LQ2VPA4 569 aa6.47□□□□□ -1.37
CHMP2B-202ENST00000466696 TBC1D10BQ4KMP7 808 aaPredicted RBP6.47□□□□□ -1.37
CHMP2B-202ENST00000466696 EEPD1Q7L9B9 569 aa6.47□□□□□ -1.37
CHMP2B-202ENST00000466696 TXNDC5Q8NBS9 432 aaKnown RBP6.47□□□□□ -1.37
CHMP2B-202ENST00000466696 TOE1Q96GM8 510 aaKnown RBP6.47□□□□□ -1.37
CHMP2B-202ENST00000466696 LCORQ96JN0 433 aaPredicted RBP6.47□□□□□ -1.37
CHMP2B-202ENST00000466696 C9orf118A6NHY6 69 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 AGRPO00253 132 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 DDX3XO00571 662 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 DGKIO75912 1065 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 ETFBP38117 255 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 EMC4Q5J8M3 183 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 STEAP3Q658P3 488 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 MRM1Q6IN84 353 aaKnown RBP6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 TTC9BQ8N6N2 239 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 TMEM145Q8NBT3 493 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 SAMD11Q96NU1 681 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 CLDND1Q9NY35 253 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 DTLQ9NZJ0 730 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 FBXL7Q9UJT9 491 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 INVSQ9Y283 1065 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 PCDHB4Q9Y5E5 795 aa6.46□□□□□ -1.38
CHMP2B-202ENST00000466696 MAFKO60675 156 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 TADA3O75528 432 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 CYP7B1O75881 506 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 LCP1P13796 627 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 ADAM17P78536 824 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 ADAM9Q13443 819 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 PUM1Q14671 1186 aaKnown RBP eCLIP6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 PRAMEF18Q5VWM3 479 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 MICAL1Q8TDZ2 1067 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 C1orf159Q96HA4 380 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 CLIC6Q96NY7 704 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 EPB41L1Q9H4G0 881 aa6.45□□□□□ -1.38
CHMP2B-202ENST00000466696 TCRBV5S2A0A599 114 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 SURF1Q15526 300 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 SLC35F1Q5T1Q4 408 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 DENND5AQ6IQ26 1287 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 ARRDC4Q8NCT1 418 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 PHOSPHO1Q8TCT1 267 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 KCTD13Q8WZ19 329 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 WRNIP1Q96S55 665 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 NPFFR2Q9Y5X5 522 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 ZNF536O15090 1300 aa6.44□□□□□ -1.38
CHMP2B-202ENST00000466696 GJB6O95452 261 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 CAPNS1P04632 268 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 CYP1A1P04798 512 aaPredicted RBP6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 ZNF28P17035 718 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 MAP4K2Q12851 820 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 SLC10A6Q3KNW5 377 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 CPZQ66K79 652 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 TEPPQ6URK8 271 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 GLB1LQ6UWU2 654 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 PLEKHH3Q7Z736 793 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 LOXL4Q96JB6 756 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 TMEM209Q96SK2 561 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 SMOC1Q9H4F8 434 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 ZNF408Q9H9D4 720 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 L2HGDHQ9H9P8 463 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 MYOTQ9UBF9 498 aa6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 R3HCC1Q9Y3T6 440 aaKnown RBP6.43□□□□□ -1.38
CHMP2B-202ENST00000466696 KRIT1O00522 736 aa6.42□□□□□ -1.38
CHMP2B-202ENST00000466696 FGRP09769 529 aa6.42□□□□□ -1.38
CHMP2B-202ENST00000466696 IL13P35225 146 aa6.42□□□□□ -1.38
CHMP2B-202ENST00000466696 PPP2R2AP63151 447 aa6.42□□□□□ -1.38
CHMP2B-202ENST00000466696 ARID5AQ03989 594 aa6.42□□□□□ -1.38
CHMP2B-202ENST00000466696 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
CHMP2B-202ENST00000466696 TMEM168Q9H0V1 697 aa6.42□□□□□ -1.38
CHMP2B-202ENST00000466696 TMPRSS5Q9H3S3 457 aa6.42□□□□□ -1.38
CHMP2B-202ENST00000466696 LRG1P02750 347 aa6.41□□□□□ -1.38
CHMP2B-202ENST00000466696 TCF3P15923 654 aa6.41□□□□□ -1.38
CHMP2B-202ENST00000466696 CYP4F22Q6NT55 531 aa6.41□□□□□ -1.38
CHMP2B-202ENST00000466696 TRIM48Q8IWZ4 208 aa6.41□□□□□ -1.38
CHMP2B-202ENST00000466696 CHST13Q8NET6 341 aa6.41□□□□□ -1.38
CHMP2B-202ENST00000466696 C8orf49Q96NF6 230 aa6.41□□□□□ -1.38
CHMP2B-202ENST00000466696 GPR27Q9NS67 375 aa6.41□□□□□ -1.38
CHMP2B-202ENST00000466696 A0A1W2PQU0 124 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 C1QTNF3-AMACRE9PGA6 284 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 LAMTOR5O43504 91 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 B4GALT3O60512 393 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 GRIA2P42262 883 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 RSPO2Q6UXX9 243 aaPredicted RBP6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 ZSWIM3Q96MP5 696 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 YTHDC1Q96MU7 727 aaKnown RBP6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 IER2Q9BTL4 223 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 SSBP3Q9BWW4 388 aaPredicted RBP6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 HSPBP1Q9NZL4 362 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 ASH2LQ9UBL3 628 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 CROTQ9UKG9 612 aa6.4□□□□□ -1.38
CHMP2B-202ENST00000466696 ZNF20P17024 532 aa6.39□□□□□ -1.39
CHMP2B-202ENST00000466696 MLLT6P55198 1093 aaPredicted RBP6.39□□□□□ -1.39
CHMP2B-202ENST00000466696 SGSM3Q96HU1 749 aa6.39□□□□□ -1.39
CHMP2B-202ENST00000466696 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
CHMP2B-202ENST00000466696 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
CHMP2B-202ENST00000466696 SLC6A20Q9NP91 592 aa6.39□□□□□ -1.39
CHMP2B-202ENST00000466696 FTSJ1Q9UET6 329 aa6.39□□□□□ -1.39
CHMP2B-202ENST00000466696 DLX3O60479 287 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms