RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 A0A1W2PRG0 241 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 C3orf80F5H4A9 247 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 RAD21O60216 631 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 DHX16O60231 1041 aaKnown RBP8.04□□□□□ -1.12
CLDN4-204ENST00000466411 ZBED4O75132 1171 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 FLOT1O75955 427 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 SLC25A27O95847 323 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 OATP04181 439 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 PARP1P09874 1014 aaKnown RBP8.04□□□□□ -1.12
CLDN4-204ENST00000466411 SNHG28P0DPA3 235 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 CASTP20810 708 aaKnown RBP8.04□□□□□ -1.12
CLDN4-204ENST00000466411 SMARCA1P28370 1054 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 CLCN1P35523 988 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 ACLYP53396 1101 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 IKQ13123 557 aaPredicted RBP8.04□□□□□ -1.12
CLDN4-204ENST00000466411 VARS2Q5ST30 1063 aaKnown RBP8.04□□□□□ -1.12
CLDN4-204ENST00000466411 SLFN13Q68D06 897 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 NFXL1Q6ZNB6 911 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 RUFY3Q7L099 469 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 FAM126BQ8IXS8 530 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 ACER1Q8TDN7 264 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 JAKMIP1Q96N16 626 aaKnown RBP8.04□□□□□ -1.12
CLDN4-204ENST00000466411 TMEM47Q9BQJ4 181 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 PPP1R12CQ9BZL4 782 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 ALDH8A1Q9H2A2 487 aaPredicted RBP8.04□□□□□ -1.12
CLDN4-204ENST00000466411 STARD7Q9NQZ5 370 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 RBM28Q9NW13 759 aaKnown RBP8.04□□□□□ -1.12
CLDN4-204ENST00000466411 SNX14Q9Y5W7 946 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 SLC12A7Q9Y666 1083 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 SLC4A7Q9Y6M7 1214 aa8.04□□□□□ -1.12
CLDN4-204ENST00000466411 COL11A1P12107 1806 aaPredicted RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 SH2B2O14492 632 aaPredicted RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 ATP2A1O14983 1001 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 NDUFB10O96000 172 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 PDHBP11177 359 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 ATP2A2P16615 1042 aaKnown RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 KCNA5P22460 613 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 RPS6KB1P23443 525 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 ADORA2AP29274 412 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 RBM25P49756 843 aaKnown RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 ZNF543Q08ER8 600 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 SEC23AQ15436 765 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 ZYXQ15942 572 aaKnown RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 SHROOM1Q2M3G4 852 aaPredicted RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 PROX2Q3B8N5 592 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 TKFCQ3LXA3 575 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 CPLX2Q6PUV4 134 aaKnown RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 BTNL9Q6UXG8 535 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 RNF180Q86T96 592 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 SIAH1Q8IUQ4 282 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 FAM177A1Q8N128 213 aaPredicted RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 LRRC47Q8N1G4 583 aaKnown RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 SHCBP1Q8NEM2 672 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 ARNTL2Q8WYA1 636 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 EDAQ92838 391 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 C22orf23Q9BZE7 217 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 MTIF3Q9H2K0 278 aaKnown RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 MROH8Q9H579 483 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 CWC22Q9HCG8 908 aaKnown RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 SLC5A4Q9NY91 659 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 FBXO40Q9UH90 709 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 PPP1R9AQ9ULJ8 1098 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 ISY1Q9ULR0 285 aaKnown RBP8.03□□□□□ -1.12
CLDN4-204ENST00000466411 IVNS1ABPQ9Y6Y0 642 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 USP24Q9UPU5 2620 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 MYO7AQ13402 2215 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 PTPRSQ13332 1948 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 SPTBN2O15020 2390 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 GPR179Q6PRD1 2367 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 ELP1O95163 1332 aa8.03□□□□□ -1.12
CLDN4-204ENST00000466411 CEP250Q9BV73 2442 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 TET1Q8NFU7 2136 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 NID2Q14112 1375 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 SOWAHBA6NEL2 793 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 hCG_1984214I3L0E3 225 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 STRNO43815 780 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 NMT2O60551 498 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 CDKL5O76039 1030 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 ZNF865P0CJ78 1059 aaPredicted RBP8.02□□□□□ -1.13
CLDN4-204ENST00000466411 RARBP10826 455 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 TAL1P17542 331 aaPredicted RBP8.02□□□□□ -1.13
CLDN4-204ENST00000466411 NBL1P41271 181 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 MCM2P49736 904 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 EXOSC10Q01780 885 aaKnown RBP8.02□□□□□ -1.13
CLDN4-204ENST00000466411 COL19A1Q14993 1142 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 RABEP1Q15276 862 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 KCNA10Q16322 511 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 PKN1Q16512 942 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 FAM83BQ5T0W9 1011 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 STOX1Q6ZVD7 989 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 ADHFE1Q8IWW8 467 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 ZNF654Q8IZM8 581 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 ABRAQ8N0Z2 381 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 SPICE1Q8N0Z3 855 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 SAMD3Q8N6K7 520 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 ZNF713Q8N859 430 aaPredicted RBP8.02□□□□□ -1.13
CLDN4-204ENST00000466411 IGDCC4Q8TDY8 1250 aa8.02□□□□□ -1.13
CLDN4-204ENST00000466411 NUP133Q8WUM0 1156 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms