RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CRKP46108 304 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 SOX4Q06945 474 aaPredicted RBP7.45□□□□□ -1.22
NCL-208ENST00000466274 MOGSQ13724 837 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 ZNF423Q2M1K9 1284 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 SPRED3Q2MJR0 410 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 MFSD14BQ5SR56 506 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 NOL9Q5SY16 702 aaKnown RBP7.45□□□□□ -1.22
NCL-208ENST00000466274 MAP3K21Q5TCX8 1036 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 FKBP1CQ5VVH2 108 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 GADL1Q6ZQY3 521 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 TTLL11Q8NHH1 800 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 GIMAP7Q8NHV1 300 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 TIFAQ96CG3 184 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 MYD88Q99836 296 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 OSBPL1AQ9BXW6 950 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 KRTAP9-9Q9BYP9 154 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 KRTAP9-4Q9BYQ2 154 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 GREM2Q9H772 168 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 PICK1Q9NRD5 415 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 MTMR7Q9Y216 660 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 AOX1Q06278 1338 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 MAPK8IP3Q9UPT6 1336 aa7.45□□□□□ -1.22
NCL-208ENST00000466274 LAMB2P55268 1798 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 A0A096LPE4 126 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 A0A0G2JLL6 359 aaPredicted RBP7.44□□□□□ -1.22
NCL-208ENST00000466274 A0A1W2PP55 124 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 A0A1W2PPZ6 126 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 XRCC5P13010 732 aaKnown RBP7.44□□□□□ -1.22
NCL-208ENST00000466274 ADMP35318 185 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 GCLCP48506 637 aaPredicted RBP7.44□□□□□ -1.22
NCL-208ENST00000466274 HDLBPQ00341 1268 aaKnown RBP7.44□□□□□ -1.22
NCL-208ENST00000466274 PCDH1Q08174 1060 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 LMOD3Q0VAK6 560 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 PAOXQ6QHF9 649 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 MIGA2Q7L4E1 593 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 PRRT2Q7Z6L0 340 aaPredicted RBP7.44□□□□□ -1.22
NCL-208ENST00000466274 SOCS4Q8WXH5 440 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 BADQ92934 168 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 NRSN2Q9GZP1 204 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 KCNH6Q9H252 994 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 EPHX3Q9H6B9 360 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 C1orf115Q9H7X2 142 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 PRDM5Q9NQX1 630 aaPredicted RBP7.44□□□□□ -1.22
NCL-208ENST00000466274 ZNF112Q9UJU3 913 aa7.44□□□□□ -1.22
NCL-208ENST00000466274 CACNA1AO00555 2505 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 SMIM22K7EJ46 135 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 MSCO60682 206 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 DDX58O95786 925 aaKnown RBP7.43□□□□□ -1.22
NCL-208ENST00000466274 CTSBP07858 339 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 FOSL1P15407 271 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 ZKSCAN1P17029 563 aaPredicted RBP7.43□□□□□ -1.22
NCL-208ENST00000466274 MAOBP27338 520 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 GRIA4P48058 902 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 RTP1P59025 263 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 CHRNDQ07001 517 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 PABPC4Q13310 644 aaKnown RBP eCLIP7.43□□□□□ -1.22
NCL-208ENST00000466274 CCNJLQ8IV13 435 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 TRIB2Q92519 343 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 TEKT1Q969V4 418 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 TCF12Q99081 682 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 ADGRE2Q9UHX3 823 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 GJD2Q9UKL4 321 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 ATP11BQ9Y2G3 1177 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 RNF114Q9Y508 228 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 ZHX2Q9Y6X8 837 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 COL4A1P02462 1669 aa7.43□□□□□ -1.22
NCL-208ENST00000466274 DNM1LO00429 736 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 CYP2B6P20813 491 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 CCDC85BQ15834 202 aaPredicted RBP7.42□□□□□ -1.22
NCL-208ENST00000466274 MSMPQ1L6U9 139 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 ABI1Q8IZP0 508 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 JARID2Q92833 1246 aaPredicted RBP7.42□□□□□ -1.22
NCL-208ENST00000466274 TBC1D32Q96NH3 1257 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 NECAB3Q96P71 396 aaPredicted RBP7.42□□□□□ -1.22
NCL-208ENST00000466274 MRIQ9BWK5 157 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 CHMP4AQ9BY43 222 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 LIN7BQ9HAP6 207 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 AGTPBP1Q9UPW5 1226 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 JAG2Q9Y219 1238 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 PSME4Q14997 1843 aa7.42□□□□□ -1.22
NCL-208ENST00000466274 RPAP1Q9BWH6 1393 aaPredicted RBP7.42□□□□□ -1.22
NCL-208ENST00000466274 LAMA2P24043 3122 aaKnown RBP7.41□□□□□ -1.22
NCL-208ENST00000466274 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 ADH5P11766 374 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 CACNB3P54284 484 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 CACNB2Q08289 660 aaPredicted RBP7.41□□□□□ -1.22
NCL-208ENST00000466274 NEXNQ0ZGT2 675 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 CCDC174Q6PII3 467 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 CCAR1Q8IX12 1150 aaKnown RBP7.41□□□□□ -1.22
NCL-208ENST00000466274 GALNT12Q8IXK2 581 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 SCYL3Q8IZE3 742 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 TBC1D22AQ8WUA7 517 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 FAM151AQ8WW52 585 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 EZH1Q92800 747 aaPredicted RBP7.41□□□□□ -1.22
NCL-208ENST00000466274 ZDHHC15Q96MV8 337 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 METTL22Q9BUU2 404 aaPredicted RBP7.41□□□□□ -1.22
NCL-208ENST00000466274 CLEC4MQ9H2X3 399 aaPredicted RBP7.41□□□□□ -1.22
NCL-208ENST00000466274 PRDM12Q9H4Q4 367 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 MAST3O60307 1309 aa7.41□□□□□ -1.22
NCL-208ENST00000466274 MYBBP1AQ9BQG0 1328 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms