RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 SRRDQ9UH36 339 aa19.48■□□□□ 0.71
PTPRU-206ENST00000465525 LOC102724159A0A0B4J2E5 919 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 GOLGA6L4A6NEF3 574 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 B4DLN1 442 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 RGS20O76081 388 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 FLT3LGP49771 235 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 PWP2Q15269 919 aaKnown RBP19.47■□□□□ 0.71
PTPRU-206ENST00000465525 STXBP2Q15833 593 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 ZNF467Q7Z7K2 595 aaPredicted RBP19.47■□□□□ 0.71
PTPRU-206ENST00000465525 ETNPPLQ8TBG4 499 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 KCNMB3Q9NPA1 279 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 JADE2Q9NQC1 790 aa19.47■□□□□ 0.71
PTPRU-206ENST00000465525 SRPRBQ9Y5M8 271 aaKnown RBP19.47■□□□□ 0.71
PTPRU-206ENST00000465525 CUTAO60888 179 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 XRCC5P13010 732 aaKnown RBP19.46■□□□□ 0.71
PTPRU-206ENST00000465525 EDNRBP24530 442 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 PRMT2P55345 433 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 PRKCZQ05513 592 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 MTMR1Q13613 665 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 XRRA1Q6P2D8 792 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 DTHD1Q6ZMT9 781 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 MPHOSPH6Q99547 160 aaKnown RBP19.46■□□□□ 0.71
PTPRU-206ENST00000465525 GABRQQ9UN88 632 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 LAD1O00515 517 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 CYP2B6P20813 491 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 TECP42680 631 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 ARL6IP4Q66PJ3 421 aaKnown RBP19.46■□□□□ 0.71
PTPRU-206ENST00000465525 SEPT14Q6ZU15 432 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 USP49Q70CQ1 688 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 FERMT2Q96AC1 680 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 MAML3Q96JK9 1138 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 APBA2Q99767 749 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 ZNF577Q9BSK1 485 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 KCNH7Q9NS40 1196 aa19.46■□□□□ 0.71
PTPRU-206ENST00000465525 PP2D1A8MPX8 630 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 PRPHP41219 470 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 LBX1P52954 281 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 UBE2HP62256 183 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 SEMA3FQ13275 785 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 IRF5Q13568 498 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 CCL14Q16627 93 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 ADALQ6DHV7 355 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 SHC4Q6S5L8 630 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 ARMCX2Q7L311 632 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 FBXO16Q8IX29 292 aaPredicted RBP19.45■□□□□ 0.7
PTPRU-206ENST00000465525 MSL3Q8N5Y2 521 aaKnown RBP19.45■□□□□ 0.7
PTPRU-206ENST00000465525 INPP4AQ96PE3 977 aaPredicted RBP19.45■□□□□ 0.7
PTPRU-206ENST00000465525 GOLPH3LQ9H4A5 285 aa19.45■□□□□ 0.7
PTPRU-206ENST00000465525 TTC12Q9H892 705 aaPredicted RBP19.45■□□□□ 0.7
PTPRU-206ENST00000465525 ASB14A6NK59 587 aa19.44■□□□□ 0.7
PTPRU-206ENST00000465525 DDX39AO00148 427 aaKnown RBP19.44■□□□□ 0.7
PTPRU-206ENST00000465525 SORBS3O60504 671 aa19.44■□□□□ 0.7
PTPRU-206ENST00000465525 EIF3JO75822 258 aaKnown RBP19.44■□□□□ 0.7
PTPRU-206ENST00000465525 CDC25AP30304 524 aa19.44■□□□□ 0.7
PTPRU-206ENST00000465525 SETQ01105 290 aaPredicted RBP19.44■□□□□ 0.7
PTPRU-206ENST00000465525 NIPA1Q7RTP0 329 aa19.44■□□□□ 0.7
PTPRU-206ENST00000465525 FSIP1Q8NA03 581 aa19.44■□□□□ 0.7
PTPRU-206ENST00000465525 GPT2Q8TD30 523 aa19.44■□□□□ 0.7
PTPRU-206ENST00000465525 AGO4Q9HCK5 861 aaKnown RBP19.44■□□□□ 0.7
PTPRU-206ENST00000465525 FLRT1Q9NZU1 646 aa19.44■□□□□ 0.7
PTPRU-206ENST00000465525 TRIM17Q9Y577 477 aa19.44■□□□□ 0.7
PTPRU-206ENST00000465525 A0A1B0GVL5 298 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 POTEMA6NI47 508 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 ATP9AO75110 1047 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 OLFML2BQ68BL8 750 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 MAMDC4Q6UXC1 1216 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 OTOP1Q7RTM1 612 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 NLRX1Q86UT6 975 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 SLC5A5Q92911 643 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 EPSTI1Q96J88 318 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 MORC2Q9Y6X9 1032 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-206ENST00000465525 IPO5O00410 1097 aaKnown RBP19.43■□□□□ 0.7
PTPRU-206ENST00000465525 LIG1P18858 919 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 ITGB3BPQ13352 177 aaPredicted RBP19.43■□□□□ 0.7
PTPRU-206ENST00000465525 LRCH2Q5VUJ6 765 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 TRMT44Q8IYL2 757 aaKnown RBP19.43■□□□□ 0.7
PTPRU-206ENST00000465525 SLFN12Q8IYM2 578 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 MORC4Q8TE76 937 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 GPRASP2Q96D09 838 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 FAM20AQ96MK3 541 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 TINF2Q9BSI4 451 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 BCAS3Q9H6U6 928 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 PCDHA12Q9UN75 941 aa19.43■□□□□ 0.7
PTPRU-206ENST00000465525 TBX3O15119 743 aa19.42■□□□□ 0.7
PTPRU-206ENST00000465525 STAM2O75886 525 aa19.42■□□□□ 0.7
PTPRU-206ENST00000465525 TMEM266Q2M3C6 531 aa19.42■□□□□ 0.7
PTPRU-206ENST00000465525 RAET1EQ8TD07 263 aa19.42■□□□□ 0.7
PTPRU-206ENST00000465525 SYMPKQ92797 1274 aaKnown RBP19.42■□□□□ 0.7
PTPRU-206ENST00000465525 PDGFCQ9NRA1 345 aa19.42■□□□□ 0.7
PTPRU-206ENST00000465525 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.42■□□□□ 0.7
PTPRU-206ENST00000465525 A0A1W2PQ27 194 aa19.41■□□□□ 0.7
PTPRU-206ENST00000465525 A0A1W2PQ64 194 aa19.41■□□□□ 0.7
PTPRU-206ENST00000465525 A0A1W2PQD8 194 aa19.41■□□□□ 0.7
PTPRU-206ENST00000465525 SPATA31C2B4DYI2 1134 aa19.41■□□□□ 0.7
PTPRU-206ENST00000465525 CHMP2AO43633 222 aa19.41■□□□□ 0.7
PTPRU-206ENST00000465525 GAS7O60861 476 aa19.41■□□□□ 0.7
PTPRU-206ENST00000465525 SNAI1O95863 264 aaPredicted RBP19.41■□□□□ 0.7
PTPRU-206ENST00000465525 FXR2P51116 673 aaKnown RBP eCLIP19.41■□□□□ 0.7
PTPRU-206ENST00000465525 GNPTABQ3T906 1256 aa19.41■□□□□ 0.7
PTPRU-206ENST00000465525 RESP18Q5W5W9 173 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms