RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 FANCLQ9NW38 375 aa7.16□□□□□ -1.26
CACNA1C-223ENST00000465278 CLEC1BQ9P126 229 aa7.16□□□□□ -1.26
CACNA1C-223ENST00000465278 BACE2Q9Y5Z0 518 aa7.16□□□□□ -1.26
CACNA1C-223ENST00000465278 TRBV23-1A0A0A0MS06 115 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 ARNTLO00327 626 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 PPP1R12AO14974 1030 aaPredicted RBP7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 THBDP07204 575 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 FGFR1P11362 822 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 PLS3P13797 630 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 HK2P52789 917 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 GFRA1P56159 465 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 PLCL1Q15111 1095 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 C21orf62-AS1Q17RA5 79 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 SDE2Q6IQ49 451 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 CPNE8Q86YQ8 564 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 NAT16Q8N8M0 369 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 KREMEN2Q8NCW0 462 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 COPS5Q92905 334 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 ALPK1Q96QP1 1244 aa7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 PDGFDQ9GZP0 370 aaPredicted RBP7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 SPAG9O60271 1321 aaKnown RBP7.15□□□□□ -1.26
CACNA1C-223ENST00000465278 RPRD2Q5VT52 1461 aaKnown RBP7.15□□□□□ -1.27
CACNA1C-223ENST00000465278 SBF2Q86WG5 1849 aa7.15□□□□□ -1.27
CACNA1C-223ENST00000465278 TRPM2O94759 1503 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 FUT4P22083 530 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 LRP8Q14114 963 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 VPS72Q15906 364 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 LONRF2Q1L5Z9 754 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 ZSWIM2Q8NEG5 633 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 FRS2Q8WU20 508 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 KCTD13Q8WZ19 329 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 PTCHD1Q96NR3 888 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 TMEFF2Q9UIK5 374 aaPredicted RBP7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 ADAMTS6Q9UKP5 1117 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 ZNF281Q9Y2X9 895 aa7.14□□□□□ -1.27
CACNA1C-223ENST00000465278 TOPAZ1Q8N9V7 1692 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 FGF10O15520 208 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 ASMTLO95671 621 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 CPP00450 1065 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 ERVFC1P60507 584 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 CBX2Q14781 532 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 ARTNQ5T4W7 220 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 RCSD1Q6JBY9 416 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 SLC23A3Q6PIS1 610 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 USP53Q70EK8 1073 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 KISS1RQ969F8 398 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 ERVK13-1Q9NX77 482 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 MRPS23Q9Y3D9 190 aaKnown RBP7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 MYO5BQ9ULV0 1848 aa7.13□□□□□ -1.27
CACNA1C-223ENST00000465278 SCG5P05408 212 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 ZGLP1P0C6A0 271 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 PAMP19021 973 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 NTRK3Q16288 839 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 SLC35F1Q5T1Q4 408 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 EEF1DP3Q658K8 133 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 HOMER1Q86YM7 354 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 KSR1Q8IVT5 923 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 NPLOC4Q8TAT6 608 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 LINC01599Q8WXQ3 324 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 APPBP2Q92624 585 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 HHIPL1Q96JK4 782 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 G6PC3Q9BUM1 346 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 TMEM260Q9NX78 707 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 TMEM59LQ9UK28 342 aa7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 VIRMAQ69YN4 1812 aaKnown RBP7.12□□□□□ -1.27
CACNA1C-223ENST00000465278 DHX57Q6P158 1386 aaKnown RBP7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 XRN1Q8IZH2 1706 aaKnown RBP7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 NPHP3-ACAD11A0A0J9YXS1 232 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 TBC1D8O95759 1140 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 RNASE1P07998 156 aaKnown RBP7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 LCP1P13796 627 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 YBX3P16989 372 aaKnown RBP eCLIP7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 LAPTM5Q13571 262 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 KCNT2Q6UVM3 1135 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 PPIL6Q8IXY8 311 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 C1orf159Q96HA4 380 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 ZFP64Q9NPA5 681 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 EHBP1L1Q8N3D4 1523 aa7.11□□□□□ -1.27
CACNA1C-223ENST00000465278 LRRIQ1Q96JM4 1722 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 WASHC2CQ9Y4E1 1318 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 FOXN1O15353 648 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 CDC45O75419 566 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 USP2O75604 605 aaPredicted RBP7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 TRHRP34981 398 aaPredicted RBP7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 MAP4K2Q12851 820 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 KIR3DS1Q14943 382 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 SLC14A2Q15849 920 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 INF2Q27J81 1249 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 ZNF792Q3KQV3 632 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 TKFCQ3LXA3 575 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 TMEM67Q5HYA8 995 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 ZC3H12BQ5HYM0 836 aaKnown RBP7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 HLA-DQA1Q5Y7H0 255 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 JAMLQ86YT9 394 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 CCDC103Q8IW40 242 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 ABI1Q8IZP0 508 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 AGBL5Q8NDL9 886 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 MAP6Q96JE9 813 aa7.1□□□□□ -1.27
CACNA1C-223ENST00000465278 FCRL2Q96LA5 508 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms