RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ZNF292O60281 2723 aa17.69■□□□□ 0.42
HDAC6-214ENST00000465269 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-214ENST00000465269 GH1P01241 217 aa17.68■□□□□ 0.42
HDAC6-214ENST00000465269 THPOP40225 353 aa17.68■□□□□ 0.42
HDAC6-214ENST00000465269 CACNA1BQ00975 2339 aa17.68■□□□□ 0.42
HDAC6-214ENST00000465269 MFSD10Q14728 455 aa17.68■□□□□ 0.42
HDAC6-214ENST00000465269 KIAA0753Q2KHM9 967 aa17.68■□□□□ 0.42
HDAC6-214ENST00000465269 TSHZ3Q63HK5 1081 aa17.68■□□□□ 0.42
HDAC6-214ENST00000465269 SEC62Q99442 399 aaKnown RBP17.68■□□□□ 0.42
HDAC6-214ENST00000465269 CD207Q9UJ71 328 aa17.68■□□□□ 0.42
HDAC6-214ENST00000465269 NCOR2Q9Y618 2525 aa17.68■□□□□ 0.42
HDAC6-214ENST00000465269 PDGFBP01127 241 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-214ENST00000465269 CASTP20810 708 aaKnown RBP17.67■□□□□ 0.42
HDAC6-214ENST00000465269 PLEKHG4Q58EX7 1191 aa17.67■□□□□ 0.42
HDAC6-214ENST00000465269 TBC1D5Q92609 795 aa17.67■□□□□ 0.42
HDAC6-214ENST00000465269 APPBP2Q92624 585 aa17.67■□□□□ 0.42
HDAC6-214ENST00000465269 TOP1MTQ969P6 601 aa17.67■□□□□ 0.42
HDAC6-214ENST00000465269 DNAH14Q0VDD8 3507 aa17.66■□□□□ 0.42
HDAC6-214ENST00000465269 LOC102724159A0A0B4J2E5 919 aa17.66■□□□□ 0.42
HDAC6-214ENST00000465269 RSPH10B2B2RC85 870 aa17.66■□□□□ 0.42
HDAC6-214ENST00000465269 CTSHP09668 335 aa17.66■□□□□ 0.42
HDAC6-214ENST00000465269 LINC00271P0C7V0 271 aa17.66■□□□□ 0.42
HDAC6-214ENST00000465269 RSPH10BP0C881 870 aa17.66■□□□□ 0.42
HDAC6-214ENST00000465269 CTDSPL2Q05D32 466 aa17.66■□□□□ 0.42
HDAC6-214ENST00000465269 PWP2Q15269 919 aaKnown RBP17.66■□□□□ 0.42
HDAC6-214ENST00000465269 IFIH1Q9BYX4 1025 aaKnown RBP17.66■□□□□ 0.42
HDAC6-214ENST00000465269 FRYLO94915 3013 aa17.66■□□□□ 0.42
HDAC6-214ENST00000465269 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
HDAC6-214ENST00000465269 AVPR2P30518 371 aa17.65■□□□□ 0.42
HDAC6-214ENST00000465269 PPARAQ07869 468 aa17.65■□□□□ 0.42
HDAC6-214ENST00000465269 DGKDQ16760 1214 aa17.65■□□□□ 0.42
HDAC6-214ENST00000465269 DHX37Q8IY37 1157 aaKnown RBP17.65■□□□□ 0.42
HDAC6-214ENST00000465269 PRRX2Q99811 253 aa17.65■□□□□ 0.42
HDAC6-214ENST00000465269 LOC730098B7Z3J9 87 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 PATL2C9JE40 543 aaKnown RBP17.64■□□□□ 0.41
HDAC6-214ENST00000465269 HAS3O00219 553 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 RNF113AO15541 343 aaKnown RBP17.64■□□□□ 0.41
HDAC6-214ENST00000465269 F2P00734 622 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 NDUFV1P49821 464 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 USH1GQ495M9 461 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 BTNL9Q6UXG8 535 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 ADGRD2Q7Z7M1 963 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 KBTBD3Q8NAB2 608 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 DNERQ8NFT8 737 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 ASIC4Q96FT7 647 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 MSLNLQ96KJ4 702 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 TAAR1Q96RJ0 339 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 CLEC1BQ9P126 229 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 COL20A1Q9P218 1284 aa17.64■□□□□ 0.41
HDAC6-214ENST00000465269 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
HDAC6-214ENST00000465269 RALGAPA2Q2PPJ7 1873 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 NCK2O43639 380 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
HDAC6-214ENST00000465269 ADAM15Q13444 863 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 CAMK1Q14012 370 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 FIBCD1Q8N539 461 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 DCAF4Q8WV16 495 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 RPGRIP1Q96KN7 1286 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 FSD1Q9BTV5 496 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 CPVLQ9H3G5 476 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 EP300Q09472 2414 aaPredicted RBP17.63■□□□□ 0.41
HDAC6-214ENST00000465269 EMSYQ7Z589 1322 aa17.63■□□□□ 0.41
HDAC6-214ENST00000465269 RANBP6O60518 1105 aaKnown RBP17.62■□□□□ 0.41
HDAC6-214ENST00000465269 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 KDM4AO75164 1064 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 DNAJB1P25685 340 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 BMPR1AP36894 532 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 SERINC5Q86VE9 423 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 SEPT8Q92599 483 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 IL17RAQ96F46 866 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 MPHOSPH6Q99547 160 aaKnown RBP17.62■□□□□ 0.41
HDAC6-214ENST00000465269 NAPBQ9H115 298 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 DDX41Q9UJV9 622 aaKnown RBP17.62■□□□□ 0.41
HDAC6-214ENST00000465269 PCDHGC5Q9Y5F6 944 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 CACNA1GO43497 2377 aa17.62■□□□□ 0.41
HDAC6-214ENST00000465269 PRR23AA6NEV1 266 aa17.61■□□□□ 0.41
HDAC6-214ENST00000465269 GNAT2P19087 354 aa17.61■□□□□ 0.41
HDAC6-214ENST00000465269 RBM10P98175 930 aaKnown RBP17.61■□□□□ 0.41
HDAC6-214ENST00000465269 SIGLEC14Q08ET2 396 aa17.61■□□□□ 0.41
HDAC6-214ENST00000465269 PKN1Q16512 942 aa17.61■□□□□ 0.41
HDAC6-214ENST00000465269 BARX2Q9UMQ3 279 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-214ENST00000465269 TRPC6Q9Y210 931 aa17.61■□□□□ 0.41
HDAC6-214ENST00000465269 USP15Q9Y4E8 981 aaPredicted RBP17.61■□□□□ 0.41
HDAC6-214ENST00000465269 MYH7BA7E2Y1 1941 aa17.6■□□□□ 0.41
HDAC6-214ENST00000465269 C5orf67F2Z3F1 127 aa17.6■□□□□ 0.41
HDAC6-214ENST00000465269 FOXP2O15409 715 aa17.6■□□□□ 0.41
HDAC6-214ENST00000465269 TREHO43280 583 aa17.6■□□□□ 0.41
HDAC6-214ENST00000465269 EYA4O95677 639 aa17.6■□□□□ 0.41
HDAC6-214ENST00000465269 RBM23Q86U06 439 aaKnown RBP17.6■□□□□ 0.41
HDAC6-214ENST00000465269 TMEM47Q9BQJ4 181 aa17.6■□□□□ 0.41
HDAC6-214ENST00000465269 C11orf84Q9BUA3 381 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-214ENST00000465269 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
HDAC6-214ENST00000465269 KIAA1217Q5T5P2 1943 aa17.6■□□□□ 0.41
HDAC6-214ENST00000465269 GLP2RO95838 553 aa17.59■□□□□ 0.41
HDAC6-214ENST00000465269 SLC3A2P08195 630 aaKnown RBP17.59■□□□□ 0.41
HDAC6-214ENST00000465269 EIF2AK2P19525 551 aaKnown RBP17.59■□□□□ 0.41
HDAC6-214ENST00000465269 CBX2Q14781 532 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-214ENST00000465269 SMRP1Q8NCR6 262 aa17.59■□□□□ 0.41
HDAC6-214ENST00000465269 SYTL5Q8TDW5 730 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-214ENST00000465269 ATP6V0A1Q93050 837 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms