RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 HSP90AA4PQ58FG1 418 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 ESCO1Q5FWF5 840 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 GALNT17Q6IS24 598 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 C8orf74Q6P047 294 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 LRIG3Q6UXM1 1119 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 TBC1D10CQ8IV04 446 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 FMNL3Q8IVF7 1028 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 ZNF654Q8IZM8 581 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 GPATCH11Q8N954 259 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 LRRC45Q96CN5 670 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 STRBPQ96SI9 672 aaKnown RBP7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 MMS19Q96T76 1030 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 INSM2Q96T92 566 aaPredicted RBP7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 LRRC27Q9C0I9 530 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 PUS7LQ9H0K6 701 aaKnown RBP7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 VPS16Q9H269 839 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 CABP5Q9NP86 173 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 GNL3LQ9NVN8 582 aaKnown RBP7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 TAB2Q9NYJ8 693 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 SWAP70Q9UH65 585 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 CCDC9Q9Y3X0 531 aaKnown RBP7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 PCDHB6Q9Y5E3 794 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 UBR2Q8IWV8 1755 aa7.97□□□□□ -1.13
CLSTN1-204ENST00000464286 TRPM3Q9HCF6 1732 aaPredicted RBP7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 PES1O00541 588 aaKnown RBP7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 CES2O00748 559 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 FOXP2O15409 715 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 IDH1O75874 414 aaKnown RBP7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 ATP1A1P05023 1023 aaKnown RBP7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 ADH1AP07327 375 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 CSF1RP07333 972 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 SLC5A1P13866 664 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 ARID4AP29374 1257 aaPredicted RBP7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 HNRNPH3P31942 346 aaKnown RBP7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 STAT6P42226 847 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 TDO2P48775 406 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 LIG3P49916 1009 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 NR1H3Q13133 447 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 ORC2Q13416 577 aaPredicted RBP7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 TCIRG1Q13488 830 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 BIRC3Q13489 604 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 CLUL1Q15846 466 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 LRRC24Q50LG9 513 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 CCDC178Q5BJE1 867 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 FOXR2Q6PJQ5 311 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 CCDC121Q6ZUS5 278 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 IQCA1Q86XH1 822 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 IFNL3Q8IZI9 196 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 ADSSL1Q8N142 457 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 ZBTB38Q8NAP3 1195 aaPredicted RBP7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 AIFM3Q96NN9 605 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 NOX5Q96PH1 765 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 ISCA1Q9BUE6 129 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 PHF20Q9BVI0 1012 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 SH3GLB2Q9NR46 395 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 CNNM1Q9NRU3 951 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 TOMM22Q9NS69 142 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 GJB4Q9NTQ9 266 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 NLRP2Q9NX02 1062 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 CAPN7Q9Y6W3 813 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 ZNF532Q9HCE3 1301 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 DOCK2Q92608 1830 aa7.96□□□□□ -1.14
CLSTN1-204ENST00000464286 MYH3P11055 1940 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 AKAP11Q9UKA4 1901 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 RREB1Q92766 1687 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 GOLGA6L10A0A0M3HER8 536 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 TTC26A0AVF1 554 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 LCA5LO95447 670 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 FAM107AO95990 144 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 CSB-PGBD3P0DP91 1061 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 KIF5BP33176 963 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 PTGIRP43119 386 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 SLC39A6Q13433 755 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 CUL1Q13616 776 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 PUM3Q15397 648 aaKnown RBP7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 SNCBQ16143 134 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 PPP2R5EQ16537 467 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 CCDC96Q2M329 555 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 COBLL1Q53SF7 1204 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 CEP85LQ5SZL2 805 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 C10orf76Q5T2E6 689 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 FOXR1Q6PIV2 292 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 RAB11FIP4Q86YS3 637 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 SPATA4Q8NEY3 305 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 RASSF8Q8NHQ8 419 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 CCHCR1Q8TD31 782 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 LPIN2Q92539 896 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 AK8Q96MA6 479 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 ERGIC2Q96RQ1 377 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 IFIH1Q9BYX4 1025 aaKnown RBP7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 VCPKMTQ9H867 229 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 CNOT10Q9H9A5 744 aaKnown RBP7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 NHEJ1Q9H9Q4 299 aaPredicted RBP7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 SUGCTQ9HAC7 445 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 VEZTQ9HBM0 779 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 ZSWIM5Q9P217 1185 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 ANAPC4Q9UJX5 808 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 PCDH11XQ9BZA7 1347 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 PCDH11YQ9BZA8 1340 aa7.95□□□□□ -1.14
CLSTN1-204ENST00000464286 A0A0G2JLW4 131 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms