RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 GIMAP8Q8ND71 665 aaPredicted RBP13.99□□□□□ -0.17
NUP58-206ENST00000463407 ISCA1Q9BUE6 129 aa13.99□□□□□ -0.17
NUP58-206ENST00000463407 NXF1Q9UBU9 619 aaKnown RBP13.99□□□□□ -0.17
NUP58-206ENST00000463407 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
NUP58-206ENST00000463407 SLFNL1Q499Z3 407 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 DGKHQ86XP1 1220 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 ABCA9Q8IUA7 1624 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 CHAMP1Q96JM3 812 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 CCDC94Q9BW85 323 aaPredicted RBP13.98□□□□□ -0.17
NUP58-206ENST00000463407 PLEKHA4Q9H4M7 779 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 E9PCH4 1651 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 ZBTB5O15062 677 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 PLA2G4BP0C869 781 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 RCSD1Q6JBY9 416 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 PALM2Q8IXS6 379 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 DESI2Q9BSY9 194 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 ELP3Q9H9T3 547 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 FAM184BQ9ULE4 1060 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 XPAP23025 273 aaPredicted RBP13.98□□□□□ -0.17
NUP58-206ENST00000463407 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 RINT1Q6NUQ1 792 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 ELMSAN1Q6PJG2 1045 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 DSTYKQ6XUX3 929 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 LINC00116Q8NCU8 138 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 TCP11Q8WWU5 503 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 GCNAQ96QF7 691 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 PARVGQ9HBI0 331 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 ZNRF3Q9ULT6 936 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 IFNAR1P17181 557 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 U2AF2P26368 475 aaKnown RBP eCLIP13.98□□□□□ -0.171e-6■■□□□ 11.4
NUP58-206ENST00000463407 JAK3P52333 1124 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 COPB1P53618 953 aaKnown RBP13.98□□□□□ -0.17
NUP58-206ENST00000463407 PAK2Q13177 524 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 CATSPER4Q7RTX7 472 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 TRIM58Q8NG06 486 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 HACL1Q9UJ83 578 aa13.98□□□□□ -0.17
NUP58-206ENST00000463407 EBAG9O00559 213 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 KCNK3O14649 394 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 AFPP02771 609 aaKnown RBP13.97□□□□□ -0.17
NUP58-206ENST00000463407 TPD52P55327 224 aaPredicted RBP13.97□□□□□ -0.17
NUP58-206ENST00000463407 CUL4BQ13620 913 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 FAM149B1Q96BN6 582 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 STK17AQ9UEE5 414 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
NUP58-206ENST00000463407 RIMBP3CA6NJZ7 1639 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 RIMBP3BA6NNM3 1639 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 RIMBP3Q9UFD9 1639 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 TMEM47Q9BQJ4 181 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 CNOT7Q9UIV1 285 aaKnown RBP13.97□□□□□ -0.17
NUP58-206ENST00000463407 ELF2Q15723 593 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 SLC44A5Q8NCS7 719 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 SLC12A6Q9UHW9 1150 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 ABCB11O95342 1321 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 NEDD4P46934 1319 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 FCER1AP12319 257 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 INTS8Q75QN2 995 aaKnown RBP13.97□□□□□ -0.17
NUP58-206ENST00000463407 FASTKD5Q7L8L6 764 aaKnown RBP13.97□□□□□ -0.17
NUP58-206ENST00000463407 GSDMAQ96QA5 445 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 SAR1BQ9Y6B6 198 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 CDC25AP30304 524 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 DDIT3P35638 169 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 AP3B2Q13367 1082 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 GRK7Q8WTQ7 553 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 SH3GLB2Q9NR46 395 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 RNF146Q9NTX7 359 aa13.97□□□□□ -0.17
NUP58-206ENST00000463407 LIFRP42702 1097 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 PLCB4Q15147 1175 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 KRT12Q99456 494 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 ERCC6LQ2NKX8 1250 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 TMED8Q6PL24 325 aaPredicted RBP13.96□□□□□ -0.17
NUP58-206ENST00000463407 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.96□□□□□ -0.17
NUP58-206ENST00000463407 MSTO1Q9BUK6 570 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 PRPSAP1Q14558 356 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 CTAGE3PQ8IX95 158 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 GRAMD1CQ8IYS0 662 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 CEP95Q96GE4 821 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 RAB17Q9H0T7 212 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 NMT2O60551 498 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 KRT15P19012 456 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 TTLL4Q14679 1199 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 HHATQ5VTY9 493 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 RFX6Q8HWS3 928 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 SMYD4Q8IYR2 804 aaPredicted RBP13.96□□□□□ -0.17
NUP58-206ENST00000463407 TAB3Q8N5C8 712 aaPredicted RBP13.96□□□□□ -0.17
NUP58-206ENST00000463407 P2RX5Q93086 422 aa13.96□□□□□ -0.17
NUP58-206ENST00000463407 K7ERI5 159 aa13.96□□□□□ -0.18
NUP58-206ENST00000463407 ADCY8P40145 1251 aa13.96□□□□□ -0.18
NUP58-206ENST00000463407 BFSP1Q12934 665 aa13.96□□□□□ -0.18
NUP58-206ENST00000463407 ZNF658Q5TYW1 1059 aaPredicted RBP13.96□□□□□ -0.18
NUP58-206ENST00000463407 RAET1EQ8TD07 263 aa13.96□□□□□ -0.18
NUP58-206ENST00000463407 NSUN6Q8TEA1 469 aaKnown RBP13.96□□□□□ -0.18
NUP58-206ENST00000463407 DHTKD1Q96HY7 919 aaPredicted RBP13.96□□□□□ -0.18
NUP58-206ENST00000463407 CRAMP1Q96RY5 1269 aa13.96□□□□□ -0.18
NUP58-206ENST00000463407 DCP1AQ9NPI6 582 aaPredicted RBP13.96□□□□□ -0.18
NUP58-206ENST00000463407 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 TBC1D16Q8TBP0 767 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 TUBGCP2Q9BSJ2 902 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 SLC38A10Q9HBR0 1119 aa13.95□□□□□ -0.18
NUP58-206ENST00000463407 RIC8AQ9NPQ8 531 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms