RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
COPS3-205ENST00000463097 ANO9A1A5B4 782 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 KLHL33A6NCF5 533 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 GOLGA8BA8MQT2 603 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 XPOTO43592 962 aaKnown RBP7.35□□□□□ -1.23
COPS3-205ENST00000463097 KRT37O76014 449 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 LSP1P33241 339 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 NEK3P51956 506 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 LSAMPQ13449 338 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 COBLL1Q53SF7 1204 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 PAOXQ6QHF9 649 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 CMIPQ8IY22 773 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 AMOTL1Q8IY63 956 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 MFSD4AQ8N468 514 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 USHBP1Q8N6Y0 703 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 LINC00116Q8NCU8 138 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 CHAMP1Q96JM3 812 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 MYRFLQ96LU7 910 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 UBA5Q9GZZ9 404 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 DUSP15Q9H1R2 295 aaPredicted RBP7.35□□□□□ -1.23
COPS3-205ENST00000463097 TOPORSQ9NS56 1045 aaPredicted RBP7.35□□□□□ -1.23
COPS3-205ENST00000463097 BSDC1Q9NW68 430 aaPredicted RBP7.35□□□□□ -1.23
COPS3-205ENST00000463097 NOC2LQ9Y3T9 749 aaKnown RBP7.35□□□□□ -1.23
COPS3-205ENST00000463097 SPO11Q9Y5K1 396 aa7.35□□□□□ -1.23
COPS3-205ENST00000463097 TIMM13Q9Y5L4 95 aaPredicted RBP7.35□□□□□ -1.23
COPS3-205ENST00000463097 FRMPD2Q68DX3 1309 aaPredicted RBP7.34□□□□□ -1.23
COPS3-205ENST00000463097 SLC12A8A0AV02 714 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 IGF2BP3O00425 579 aaKnown RBP eCLIP7.34□□□□□ -1.23
COPS3-205ENST00000463097 FGF10O15520 208 aaPredicted RBP7.34□□□□□ -1.23
COPS3-205ENST00000463097 ASGR2P07307 311 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 SYPP08247 313 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 ZBTB48P10074 688 aaPredicted RBP7.34□□□□□ -1.23
COPS3-205ENST00000463097 PHKG2P15735 406 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 PDE6AP16499 860 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 PAX3P23760 479 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 GPR3P46089 330 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 PCBP3P57721 371 aaKnown RBP7.34□□□□□ -1.23
COPS3-205ENST00000463097 PHC1P78364 1004 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 HTRA3P83110 453 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 ZNF174Q15697 407 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 EFCAB2Q5VUJ9 269 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 OSTM1Q86WC4 334 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 CPNE8Q86YQ8 564 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 FAM20CQ8IXL6 584 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 SPICE1Q8N0Z3 855 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 UTP4Q969X6 686 aaKnown RBP7.34□□□□□ -1.23
COPS3-205ENST00000463097 PTCHD1Q96NR3 888 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 KCNJ15Q99712 375 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 CDIP1Q9H305 208 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 MAN1C1Q9NR34 630 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.23
COPS3-205ENST00000463097 TAGLN3Q9UI15 199 aa7.34□□□□□ -1.23
COPS3-205ENST00000463097 SSU72P8A0A1W2PR75 194 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 H2AFYO75367 372 aaKnown RBP7.33□□□□□ -1.24
COPS3-205ENST00000463097 HSPA6P17066 643 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 SLC9A1P19634 815 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 NOS3P29474 1203 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 IREB2P48200 963 aaKnown RBP7.33□□□□□ -1.24
COPS3-205ENST00000463097 GTF2A2P52657 109 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 SMAD3P84022 425 aaKnown RBP7.33□□□□□ -1.24
COPS3-205ENST00000463097 SAFBQ15424 915 aaKnown RBP eCLIP7.33□□□□□ -1.24
COPS3-205ENST00000463097 SMAD2Q15796 467 aaKnown RBP7.33□□□□□ -1.24
COPS3-205ENST00000463097 CLUL1Q15846 466 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 GPR158Q5T848 1215 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 C11orf96Q7Z7L8 435 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 LMBR1Q8WVP7 490 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 WFDC12Q8WWY7 111 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 TTC17Q96AE7 1141 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 E2F7Q96AV8 911 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 ELF4Q99607 663 aaPredicted RBP7.33□□□□□ -1.24
COPS3-205ENST00000463097 TRIT1Q9H3H1 467 aaKnown RBP7.33□□□□□ -1.24
COPS3-205ENST00000463097 KCNF1Q9H3M0 494 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 NOP53Q9NZM5 478 aaKnown RBP7.33□□□□□ -1.24
COPS3-205ENST00000463097 SAP30BPQ9UHR5 308 aaKnown RBP7.33□□□□□ -1.24
COPS3-205ENST00000463097 FBXL7Q9UJT9 491 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 TCFL5Q9UL49 500 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 INTUQ9ULD6 942 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 MKL2Q9ULH7 1088 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 INVSQ9Y283 1065 aa7.33□□□□□ -1.24
COPS3-205ENST00000463097 GNAT3A8MTJ3 354 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 ZNF561-AS1K7EIQ3 104 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 APAF1O14727 1248 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 PPFIA4O75335 1185 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 FOSP01100 380 aaPredicted RBP7.32□□□□□ -1.24
COPS3-205ENST00000463097 KRT15P19012 456 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 BCL6P41182 706 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 JAM2P57087 298 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 RPL11P62913 178 aaKnown RBP7.32□□□□□ -1.24
COPS3-205ENST00000463097 RBM10P98175 930 aaKnown RBP7.32□□□□□ -1.24
COPS3-205ENST00000463097 IRF9Q00978 393 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 LAPTM5Q13571 262 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 ACAP2Q15057 778 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 HSP90AB4PQ58FF6 505 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 RRP12Q5JTH9 1297 aaKnown RBP7.32□□□□□ -1.24
COPS3-205ENST00000463097 OGFOD3Q6PK18 319 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 TSPYL5Q86VY4 417 aaPredicted RBP7.32□□□□□ -1.24
COPS3-205ENST00000463097 ARMC10Q8N2F6 343 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 KIAA1958Q8N8K9 716 aa7.32□□□□□ -1.24
COPS3-205ENST00000463097 ZNF610Q8N9Z0 462 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms