RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 TRBV23OR9-2A0A075B6M9 112 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 GNAT3A8MTJ3 354 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 C9orf172C9J069 976 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 H7C1D1 291 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 IGF2BP3O00425 579 aaKnown RBP eCLIP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 KCNK3O14649 394 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 FGF10O15520 208 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 XPOTO43592 962 aaKnown RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 IL33O95760 270 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 LTFP02788 710 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 NBPF7P0C2Y1 421 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 PDE6AP16499 860 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 TPP2P29144 1249 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 CYP2C19P33261 490 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 ADMP35318 185 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 JAM2P57087 298 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 PCBP3P57721 371 aaKnown RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 LACTBP83111 547 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 PURAQ00577 322 aaKnown RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 NRG1Q02297 640 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 LRRC32Q14392 662 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 CLUL1Q15846 466 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 UVSSAQ2YD98 709 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 ARHGAP29Q52LW3 1261 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 TMEM240Q5SV17 173 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 CDKAL1Q5VV42 579 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 IL31Q6EBC2 164 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 OGFOD3Q6PK18 319 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 C22orf34Q6ZV56 151 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 EPM2AIP1Q7L775 607 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 OTOP1Q7RTM1 612 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 FAM9AQ8IZU1 332 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 EFHBQ8N7U6 833 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 LINC00116Q8NCU8 138 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 HSPBAP1Q96EW2 488 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 IL17RAQ96F46 866 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 MEGF10Q96KG7 1140 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 PTCHD1Q96NR3 888 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 CDADC1Q9BWV3 514 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 MS4A5Q9H3V2 200 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 PRDM11Q9NQV5 511 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 ANLNQ9NQW6 1124 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 TOPORSQ9NS56 1045 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 BTG4Q9NY30 223 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 CLDND1Q9NY35 253 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 RCAN3Q9UKA8 241 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 TCFL5Q9UL49 500 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 NOC2LQ9Y3T9 749 aaKnown RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 TIMM13Q9Y5L4 95 aaPredicted RBP4.92□□□□□ -1.62
GPNMB-205ENST00000463011 MRFAP1Q9Y605 127 aa4.92□□□□□ -1.62
GPNMB-205ENST00000463011 SLC12A8A0AV02 714 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 C7orf72A4D263 438 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 DVL2O14641 736 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 H2AFYO75367 372 aaKnown RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 ARHGEF15O94989 841 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 IFIT2P09913 472 aaKnown RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 SPATA31C1P0DKV0 1188 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 ZBTB48P10074 688 aaPredicted RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 TRIM27P14373 513 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 LPOP22079 712 aaPredicted RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 NEK3P51956 506 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 RPL11P62913 178 aaKnown RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 HTRA3P83110 453 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 GTF2H3Q13889 308 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 GRM3Q14832 879 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 ACAP2Q15057 778 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 TERF2Q15554 542 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 ZNF174Q15697 407 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 VPS72Q15906 364 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 C10orf62Q5T681 223 aaPredicted RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 ZPBP2Q6X784 338 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 TSPYL5Q86VY4 417 aaPredicted RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 RASSF3Q86WH2 238 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 CMTR2Q8IYT2 770 aaKnown RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 DZIP1LQ8IYY4 767 aaKnown RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 SHISA5Q8N114 240 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 NAT16Q8N8M0 369 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 PANK1Q8TE04 598 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 GATA6Q92908 595 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 SCYL1Q96KG9 808 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 TBC1D32Q96NH3 1257 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 BOCQ9BWV1 1114 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 CDIP1Q9H305 208 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 TRIT1Q9H3H1 467 aaKnown RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 TOMM22Q9NS69 142 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 ZSWIM5Q9P217 1185 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 DDX20Q9UHI6 824 aaKnown RBP4.91□□□□□ -1.62
GPNMB-205ENST00000463011 USP25Q9UHP3 1055 aa4.91□□□□□ -1.62
GPNMB-205ENST00000463011 LCHNA4D1U4 455 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 KLHL33A6NCF5 533 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 WTIPA6NIX2 430 aaPredicted RBP4.9□□□□□ -1.63
GPNMB-205ENST00000463011 TBC1D8O95759 1140 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 COL6A2P12110 1019 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 LSP1P33241 339 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 GPR3P46089 330 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 IRF9Q00978 393 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 MBTPS1Q14703 1052 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 GPR19Q15760 415 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 CYP27C1Q4G0S4 372 aa4.9□□□□□ -1.63
GPNMB-205ENST00000463011 COBLL1Q53SF7 1204 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms