RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 EHMT1Q9H9B1 1298 aa21.6■■□□□ 1.05
COL9A3-203ENST00000462700 TMEM39AQ9NV64 488 aa21.6■■□□□ 1.05
COL9A3-203ENST00000462700 SPATA31C2B4DYI2 1134 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 CPLX1O14810 134 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 TLR3O15455 904 aaKnown RBP21.59■■□□□ 1.05
COL9A3-203ENST00000462700 CLK2P49760 499 aaKnown RBP21.59■■□□□ 1.05
COL9A3-203ENST00000462700 AK2P54819 239 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 SEMA3FQ13275 785 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 ANKRD1Q15327 319 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 MYSM1Q5VVJ2 828 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 PPTC7Q8NI37 304 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 CCDC12Q8WUD4 166 aaPredicted RBP21.59■■□□□ 1.05
COL9A3-203ENST00000462700 ZMYND12Q9H0C1 365 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 TPCN1Q9ULQ1 816 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 LTBP2Q14767 1821 aa21.59■■□□□ 1.05
COL9A3-203ENST00000462700 A0A1W2PPC1 479 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 SORBS3O60504 671 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 FOSP01100 380 aaPredicted RBP21.58■■□□□ 1.05
COL9A3-203ENST00000462700 CD4P01730 458 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 SSRP1Q08945 709 aaKnown RBP21.58■■□□□ 1.05
COL9A3-203ENST00000462700 AP3B2Q13367 1082 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 DGKDQ16760 1214 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 NLRX1Q86UT6 975 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 TRIM22Q8IYM9 498 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 PGBD1Q96JS3 809 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 ANO3Q9BYT9 981 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 TMEM260Q9NX78 707 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 TBX21Q9UL17 535 aa21.58■■□□□ 1.05
COL9A3-203ENST00000462700 CEP290O15078 2479 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 ITGB8P26012 769 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 SCRN1Q12765 414 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 HSDL1Q3SXM5 330 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 CPLX2Q6PUV4 134 aaKnown RBP21.57■■□□□ 1.04
COL9A3-203ENST00000462700 BADQ92934 168 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 GPRASP2Q96D09 838 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 SPATA33Q96N06 139 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 UBE2OQ9C0C9 1292 aaKnown RBP21.57■■□□□ 1.04
COL9A3-203ENST00000462700 SLKQ9H2G2 1235 aaPredicted RBP21.57■■□□□ 1.04
COL9A3-203ENST00000462700 MLXIPQ9HAP2 919 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 C6orf50Q9HD87 102 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 UBIAD1Q9Y5Z9 338 aa21.57■■□□□ 1.04
COL9A3-203ENST00000462700 PFKFB2O60825 505 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 HOXD8P13378 290 aaPredicted RBP21.56■■□□□ 1.04
COL9A3-203ENST00000462700 RAG1P15918 1043 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 ITGB5P18084 799 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 NEK4P51957 841 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 NEDD9Q14511 834 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 NBPF20Q3BBV1 942 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 POTEDQ86YR6 584 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 CCDC148Q8NFR7 591 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 BCAS3Q9H6U6 928 aa21.56■■□□□ 1.04
COL9A3-203ENST00000462700 RANBP2P49792 3224 aaKnown RBP21.56■■□□□ 1.04
COL9A3-203ENST00000462700 ADAMTS3O15072 1205 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 B4GALT4O60513 344 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 DEXIO95424 95 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 GNA11P29992 359 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 JAKMIP3Q5VZ66 844 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 NFRKBQ6P4R8 1299 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 METTL7BQ6UX53 244 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 KAT2BQ92831 832 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 CDHR1Q96JP9 859 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 SENP7Q9BQF6 1050 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 TRPV6Q9H1D0 765 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 SH3GLB2Q9NR46 395 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 VPS54Q9P1Q0 977 aa21.55■■□□□ 1.04
COL9A3-203ENST00000462700 SREBF1P36956 1147 aa21.54■■□□□ 1.04
COL9A3-203ENST00000462700 MTMR1Q13613 665 aa21.54■■□□□ 1.04
COL9A3-203ENST00000462700 FAM47CQ5HY64 1035 aa21.54■■□□□ 1.04
COL9A3-203ENST00000462700 CYFIP1Q7L576 1253 aa21.54■■□□□ 1.04
COL9A3-203ENST00000462700 TDHQ8IZJ6 230 aa21.54■■□□□ 1.04
COL9A3-203ENST00000462700 PPP1R13LQ8WUF5 828 aa21.54■■□□□ 1.04
COL9A3-203ENST00000462700 JADE2Q9NQC1 790 aa21.54■■□□□ 1.04
COL9A3-203ENST00000462700 PPFIA4O75335 1185 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 CDKL5O76039 1030 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 F2P00734 622 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 TIMP1P01033 207 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 ZNF286BP0CG31 522 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 PTPN11Q06124 597 aaPredicted RBP21.53■■□□□ 1.04
COL9A3-203ENST00000462700 MCTP2Q6DN12 878 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 REXO1Q8N1G1 1221 aaKnown RBP21.53■■□□□ 1.04
COL9A3-203ENST00000462700 MXRA8Q9BRK3 442 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 KATNAL1Q9BW62 490 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 TRMT13Q9NUP7 481 aaKnown RBP21.53■■□□□ 1.04
COL9A3-203ENST00000462700 SCN10AQ9Y5Y9 1956 aa21.53■■□□□ 1.04
COL9A3-203ENST00000462700 NOP56O00567 594 aaKnown RBP21.52■■□□□ 1.04
COL9A3-203ENST00000462700 MAFGO15525 162 aa21.52■■□□□ 1.04
COL9A3-203ENST00000462700 ATP9AO75110 1047 aa21.52■■□□□ 1.04
COL9A3-203ENST00000462700 LARGE1O95461 756 aa21.52■■□□□ 1.04
COL9A3-203ENST00000462700 KCNA2P16389 499 aa21.52■■□□□ 1.04
COL9A3-203ENST00000462700 CHMP4BP1P59074 171 aa21.52■■□□□ 1.04
COL9A3-203ENST00000462700 ME3Q16798 604 aa21.52■■□□□ 1.04
COL9A3-203ENST00000462700 GIMAP8Q8ND71 665 aaPredicted RBP21.52■■□□□ 1.04
COL9A3-203ENST00000462700 BICD2Q8TD16 824 aa21.52■■□□□ 1.04
COL9A3-203ENST00000462700 PPP1R12CQ9BZL4 782 aa21.52■■□□□ 1.04
COL9A3-203ENST00000462700 HAS3O00219 553 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 SUPT20HL2P0C7V6 817 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 PSEN2P49810 448 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 NLRP5P59047 1200 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 ARHGAP4P98171 946 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 MFSD10Q14728 455 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms