RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 C17orf80Q9BSJ5 609 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 ALG1Q9BT22 464 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 RALGAPA2Q2PPJ7 1873 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 KCNA5P22460 613 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 NT5C2P49902 561 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 PUS10Q3MIT2 529 aaKnown RBP12.68□□□□□ -0.38
CBX3-205ENST00000462165 ARHGEF16Q5VV41 709 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 FAM117BQ6P1L5 589 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.68□□□□□ -0.38
CBX3-205ENST00000462165 TBC1D10CQ8IV04 446 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
CBX3-205ENST00000462165 ADGRF4Q8IZF3 695 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 PNMA1Q8ND90 353 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 ESR2Q92731 530 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 MRPL38Q96DV4 380 aaKnown RBP12.68□□□□□ -0.38
CBX3-205ENST00000462165 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
CBX3-205ENST00000462165 PXMP2Q9NR77 195 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 CTNNA3Q9UI47 895 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 MRPL11Q9Y3B7 192 aaKnown RBP12.68□□□□□ -0.38
CBX3-205ENST00000462165 MRVI1Q9Y6F6 885 aa12.68□□□□□ -0.38
CBX3-205ENST00000462165 COL4A6Q14031 1691 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 NEDD4P46934 1319 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 CCDC171Q6TFL3 1326 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 EMSYQ7Z589 1322 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 ATG2AQ2TAZ0 1938 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 AMHP03971 560 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 NR3C2P08235 984 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 ZNF286BP0CG31 522 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 ALADP13716 330 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 EIF2AK2P19525 551 aaKnown RBP12.67□□□□□ -0.38
CBX3-205ENST00000462165 PDE1AP54750 535 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 ZNF200P98182 395 aaPredicted RBP12.67□□□□□ -0.38
CBX3-205ENST00000462165 NMIQ13287 307 aaPredicted RBP12.67□□□□□ -0.38
CBX3-205ENST00000462165 HIC1Q14526 733 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 QRICH1Q2TAL8 776 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 CCDC178Q5BJE1 867 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 PTCRAQ6ISU1 281 aaPredicted RBP12.67□□□□□ -0.38
CBX3-205ENST00000462165 MYOCDQ8IZQ8 938 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 DBF4BQ8NFT6 615 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 SAMD11Q96NU1 681 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 ZBTB47Q9UFB7 747 aaPredicted RBP12.67□□□□□ -0.38
CBX3-205ENST00000462165 PIEZO1Q92508 2521 aa12.67□□□□□ -0.38
CBX3-205ENST00000462165 SSTR3P32745 418 aaPredicted RBP12.66□□□□□ -0.38
CBX3-205ENST00000462165 GHRHRQ02643 423 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 PTPROQ16827 1216 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 EPC2Q52LR7 807 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 PLEKHG4Q58EX7 1191 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 ANKRD45Q5TZF3 282 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 KCNV1Q6PIU1 500 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 SERINC5Q86VE9 423 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 IQCA1Q86XH1 822 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 FBXO11Q86XK2 927 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 ANKS1AQ92625 1134 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 KAT14Q9H8E8 782 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
CBX3-205ENST00000462165 RSPH10B2B2RC85 870 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 H3BNC9 293 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 RBAK-RBAKDNI3L0D1 243 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 RGS20O76081 388 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 CFBP00751 764 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 RSPH10BP0C881 870 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 THPOP40225 353 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 HSD17B4P51659 736 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 HSDL1Q3SXM5 330 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
CBX3-205ENST00000462165 ALYREFQ86V81 257 aaKnown RBP12.65□□□□□ -0.38
CBX3-205ENST00000462165 PABPC5Q96DU9 382 aaKnown RBP12.65□□□□□ -0.38
CBX3-205ENST00000462165 SPATA33Q96N06 139 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 PDCD2LQ9BRP1 358 aa12.65□□□□□ -0.38
CBX3-205ENST00000462165 MAP3K20Q9NYL2 800 aaKnown RBP12.65□□□□□ -0.38
CBX3-205ENST00000462165 ZNF213O14771 459 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 OPLAHO14841 1288 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
CBX3-205ENST00000462165 HOXC8P31273 242 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 MFAP1P55081 439 aaKnown RBP12.64□□□□□ -0.39
CBX3-205ENST00000462165 COL19A1Q14993 1142 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 STOX1Q6ZVD7 989 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 SAMD3Q8N6K7 520 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 BANK1Q8NDB2 785 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 TOP1MTQ969P6 601 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 ZSCAN10Q96SZ4 725 aaPredicted RBP12.64□□□□□ -0.39
CBX3-205ENST00000462165 C16orf70Q9BSU1 422 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 PRKAG3Q9UGI9 489 aa12.64□□□□□ -0.39
CBX3-205ENST00000462165 DOCK5Q9H7D0 1870 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 KAT6AQ92794 2004 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 POTEB3A0JP26 581 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 C17orf102A2RUQ5 167 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 H3BQ06 376 aaPredicted RBP12.63□□□□□ -0.39
CBX3-205ENST00000462165 DCXO43602 365 aa12.63□□□□□ -0.39
CBX3-205ENST00000462165 DHX16O60231 1041 aaKnown RBP12.63□□□□□ -0.39
CBX3-205ENST00000462165 CAND2O75155 1236 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms