RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 EZH2Q15910 746 aaKnown RBP6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 SULT6B1Q6IMI4 303 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 ATG14Q6ZNE5 492 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 OXR1Q8N573 874 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 CPLX3Q8WVH0 158 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 NKD1Q969G9 470 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 ASPNQ9BXN1 380 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 RNF32Q9H0A6 362 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 WNK3Q9BYP7 1800 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 RREB1Q92766 1687 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 THSD7AQ9UPZ6 1657 aa6.19□□□□□ -1.42
ATPAF1-203ENST00000460928 LRRC37A3O60309 1634 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 TCAF2A6NFQ2 919 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 ETV2O00321 342 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 F13A1P00488 732 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 IL2RBP14784 551 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 APOBRQ0VD83 1088 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 RALBP1Q15311 655 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 NFE2L2Q16236 605 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 ANKS3Q6ZW76 656 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 CCDC146Q8IYE0 955 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 PHACTR3Q96KR7 559 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 KREMEN1Q96MU8 473 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 SLC6A17Q9H1V8 727 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 KCNK12Q9HB15 430 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 CWC22Q9HCG8 908 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 REV1Q9UBZ9 1251 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 PCDHA11Q9Y5I1 949 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 IGSF1Q8N6C5 1336 aa6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 MYBBP1AQ9BQG0 1328 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-203ENST00000460928 CYP27B1O15528 508 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 ANP32CO43423 234 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 U2AF1L5P0DN76 240 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 NCLP19338 710 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 TRHRP34981 398 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 CRKP46108 304 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 U2AF1Q01081 240 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 CHRNEQ04844 493 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 DDB1Q16531 1140 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 TAF7LQ5H9L4 462 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 SDE2Q6IQ49 451 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 FAM196AQ6ZSG2 479 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 SLITRK4Q8IW52 837 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 MRFAP1L1Q96HT8 127 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 CCDC74BQ96LY2 380 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 ZNF281Q9Y2X9 895 aa6.17□□□□□ -1.42
ATPAF1-203ENST00000460928 PCNTO95613 3336 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 ABCC6O95255 1503 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 ANKRD62A6NC57 917 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 PEX10O60683 326 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 LRRN2O75325 713 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 HTR3BO95264 441 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 PRKAR2BP31323 418 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 TEKQ02763 1124 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 SERINC3Q13530 473 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 SNX17Q15036 470 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 CIAPIN1Q6FI81 312 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 ZNF662Q6ZS27 426 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 TTLL10Q6ZVT0 673 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 SPPL2CQ8IUH8 684 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 RAPGEF4Q8WZA2 1011 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 KCNN1Q92952 543 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 MKL1Q969V6 931 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 VWCEQ96DN2 955 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 SRRTQ9BXP5 876 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 SIRPGQ9P1W8 387 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 SMG5Q9UPR3 1016 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 YBX2Q9Y2T7 364 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 POLR3KQ9Y2Y1 108 aaPredicted RBP6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 RRP7AQ9Y3A4 280 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 KIF24Q5T7B8 1368 aa6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 PARP4Q9UKK3 1724 aaKnown RBP6.16□□□□□ -1.42
ATPAF1-203ENST00000460928 EXOC5O00471 708 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 TLR3O15455 904 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 KLF4O43474 513 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 SEMA7AO75326 666 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 DEKP35659 375 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 LINC00310P59036 64 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 DUSP4Q13115 394 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 MPP2Q14168 576 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 DCTN1Q14203 1278 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 MTHFSDQ2M296 383 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 SEZ6Q53EL9 994 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 TIGD5Q53EQ6 642 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 ZNF530Q6P9A1 599 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 ANKS4BQ8N8V4 417 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 FBXO27Q8NI29 283 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 BAHD1Q8TBE0 780 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 ZCRB1Q8TBF4 217 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 ENOX1Q8TC92 643 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 SYTL4Q96C24 671 aaPredicted RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 CFAP53Q96M91 514 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 TRIM55Q9BYV6 548 aa6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 R3HCC1Q9Y3T6 440 aaKnown RBP6.15□□□□□ -1.42
ATPAF1-203ENST00000460928 OVOS2A0A0G2JMS6 1433 aa6.15□□□□□ -1.43
ATPAF1-203ENST00000460928 NCAPD2Q15021 1401 aa6.15□□□□□ -1.43
ATPAF1-203ENST00000460928 SHISA3A0PJX4 238 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 CHURC1-FNTBB4DL54 471 aa6.14□□□□□ -1.43
ATPAF1-203ENST00000460928 MCM4P33991 863 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms