RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 POTEB3A0JP26 581 aa17.04■□□□□ 0.32
LMNB1-203ENST00000460265 POTECB2RU33 542 aa17.04■□□□□ 0.32
LMNB1-203ENST00000460265 NDUFA10O95299 355 aa17.04■□□□□ 0.32
LMNB1-203ENST00000460265 DCAF17Q5H9S7 520 aaPredicted RBP17.04■□□□□ 0.32
LMNB1-203ENST00000460265 POTEBQ6S5H4 581 aa17.04■□□□□ 0.32
LMNB1-203ENST00000460265 ACBD3Q9H3P7 528 aa17.04■□□□□ 0.32
LMNB1-203ENST00000460265 MYH6P13533 1939 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 SFI1A8K8P3 1242 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 PPFIA4O75335 1185 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 EEF1GP26641 437 aaKnown RBP17.03■□□□□ 0.32
LMNB1-203ENST00000460265 GSCP56915 257 aaPredicted RBP17.03■□□□□ 0.32
LMNB1-203ENST00000460265 CCDC181Q5TID7 509 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 PODNQ7Z5L7 613 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 FBXO11Q86XK2 927 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 CERKQ8TCT0 537 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 JAKMIP2Q96AA8 810 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 FAM107BQ9H098 131 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 SUGCTQ9HAC7 445 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 LIMA1Q9UHB6 759 aaKnown RBP17.03■□□□□ 0.32
LMNB1-203ENST00000460265 COL16A1Q07092 1604 aaPredicted RBP17.03■□□□□ 0.32
LMNB1-203ENST00000460265 H0YHG0 523 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 SRGAP2O75044 1071 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
LMNB1-203ENST00000460265 NID2Q14112 1375 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 TRIM14Q14142 442 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 PPP2R5AQ15172 486 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 PTPROQ16827 1216 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 KRT26Q7Z3Y9 468 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 RPAINQ86UA6 219 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 CCDC84Q86UT8 332 aaPredicted RBP17.03■□□□□ 0.32
LMNB1-203ENST00000460265 ANKS1AQ92625 1134 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 FAM204AQ9H8W3 233 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 HOMER2Q9NSB8 354 aa17.03■□□□□ 0.32
LMNB1-203ENST00000460265 ZBTB12Q9Y330 459 aaPredicted RBP17.03■□□□□ 0.32
LMNB1-203ENST00000460265 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
LMNB1-203ENST00000460265 USO1O60763 962 aaKnown RBP17.02■□□□□ 0.32
LMNB1-203ENST00000460265 KCNJ6P48051 423 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 ERVK-24P63145 666 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 KRT83P78385 493 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 FAM26FQ5R3K3 315 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 CCDC65Q8IXS2 484 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 MYOCDQ8IZQ8 938 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 KBTBD4Q9NVX7 518 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 HDAC6Q9UBN7 1215 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 LGALS16A8MUM7 142 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 MAP3K9P80192 1104 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 TPH2Q8IWU9 490 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 PROM2Q8N271 834 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 CCDC155Q8N6L0 562 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 GIMAP8Q8ND71 665 aaPredicted RBP17.02■□□□□ 0.32
LMNB1-203ENST00000460265 CCDC51Q96ER9 411 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 MED4Q9NPJ6 270 aa17.02■□□□□ 0.32
LMNB1-203ENST00000460265 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.31
LMNB1-203ENST00000460265 RHOBTB3O94955 611 aa17.02■□□□□ 0.31
LMNB1-203ENST00000460265 IBSPP21815 317 aaPredicted RBP17.02■□□□□ 0.31
LMNB1-203ENST00000460265 SHMT1P34896 483 aa17.02■□□□□ 0.31
LMNB1-203ENST00000460265 TMC4Q7Z404 712 aa17.02■□□□□ 0.31
LMNB1-203ENST00000460265 TMEM139Q8IV31 216 aa17.02■□□□□ 0.31
LMNB1-203ENST00000460265 SEPT11Q9NVA2 429 aaKnown RBP17.02■□□□□ 0.31
LMNB1-203ENST00000460265 MAP2K7O14733 419 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 ZMYND10O75800 440 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 HOXA10P31260 410 aaPredicted RBP17.01■□□□□ 0.31
LMNB1-203ENST00000460265 MRPS25P82663 173 aaKnown RBP17.01■□□□□ 0.31
LMNB1-203ENST00000460265 APOBEC3HQ6NTF7 200 aaKnown RBP17.01■□□□□ 0.31
LMNB1-203ENST00000460265 GBP6Q6ZN66 633 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 GLIS3Q8NEA6 775 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 AMNQ9BXJ7 453 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 ANO3Q9BYT9 981 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 LRRC27Q9C0I9 530 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 POTEFA5A3E0 1075 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 TBCAO75347 108 aaKnown RBP17.01■□□□□ 0.31
LMNB1-203ENST00000460265 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 RAPGEF1Q13905 1077 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 DLGAP5Q15398 846 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 POTEGQ6S5H5 508 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 POTEEQ6S8J3 1075 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 ERMNQ8TAM6 284 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 FANCGO15287 622 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 PRPHP41219 470 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 FBXW10Q5XX13 1052 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 RSRC2Q7L4I2 434 aaKnown RBP17.01■□□□□ 0.31
LMNB1-203ENST00000460265 CEP112Q8N8E3 955 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 SPAG5Q96R06 1193 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 CUEDC2Q9H467 287 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 RIOX1Q9H6W3 641 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 ABCB6Q9NP58 842 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 MRFAP1Q9Y605 127 aa17.01■□□□□ 0.31
LMNB1-203ENST00000460265 RPS6KA5O75582 802 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 LRCH2Q5VUJ6 765 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 KCNK18Q7Z418 384 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 JPH2Q9BR39 696 aaPredicted RBP17■□□□□ 0.31
LMNB1-203ENST00000460265 THAP9Q9H5L6 903 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 DNM3Q9UQ16 869 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 GRB10Q13322 594 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 CCDC70Q6NSX1 233 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 FAM163AQ96GL9 167 aaPredicted RBP17■□□□□ 0.31
LMNB1-203ENST00000460265 NDST4Q9H3R1 872 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 RABEP2Q9H5N1 569 aa17■□□□□ 0.31
LMNB1-203ENST00000460265 CDC23Q9UJX2 597 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms