RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 MTMR9Q96QG7 549 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 HSD3B7Q9H2F3 369 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 CD2APQ9Y5K6 639 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 IPO7O95373 1038 aaKnown RBP10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 ARP10275 920 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 SPAG1Q07617 926 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 TRAF1Q13077 416 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 SNRNP48Q6IEG0 339 aaKnown RBP10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 KRT26Q7Z3Y9 468 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 OTUD5Q96G74 571 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 DYDC2Q96IM9 177 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 CNOT6LQ96LI5 555 aaKnown RBP10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 TUBGCP2Q9BSJ2 902 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 MRPL44Q9H9J2 332 aaKnown RBP10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 KBTBD4Q9NVX7 518 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 FEM1BQ9UK73 627 aa10.41□□□□□ -0.74
NUDCD3-203ENST00000460110 ADM5C9JUS6 153 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 RIOK3O14730 519 aaKnown RBP10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 VCAM1P19320 739 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 CDC25BP30305 580 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 NAP1L1P55209 391 aaKnown RBP10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 AP3B2Q13367 1082 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 UTP14CQ5TAP6 766 aaKnown RBP10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 CACNA2D4Q7Z3S7 1137 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 FAM160B2Q86V87 743 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 TIAM2Q8IVF5 1701 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 ANKRD31Q8N7Z5 1873 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 RMDN3Q96TC7 470 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 NT5C3AQ9H0P0 336 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 BLOC1S4Q9NUP1 217 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 IMPACTQ9P2X3 320 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 RWDD2AQ9UIY3 292 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 CSADQ9Y600 493 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 ZNF831Q5JPB2 1677 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 BICDL2A1A5D9 508 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 SOWAHDA6NJG2 315 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 CLIC2O15247 247 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 PRPF6O94906 941 aaKnown RBP10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 LMNB1P20700 586 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 USP11P51784 963 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 ARHGAP29Q52LW3 1261 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 TCP11X2Q5H9J9 407 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 DCAF17Q5H9S7 520 aaPredicted RBP10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 CATSPER3Q86XQ3 398 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 MYOCDQ8IZQ8 938 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 SYCP3Q8IZU3 236 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 SMCR8Q8TEV9 937 aaPredicted RBP10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.748e-8■■■■□ 25.7
NUDCD3-203ENST00000460110 TRERF1Q96PN7 1200 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 INTS13Q9NVM9 706 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 C10orf71Q711Q0 1435 aa10.4□□□□□ -0.74
NUDCD3-203ENST00000460110 PPP1R12BO60237 982 aaPredicted RBP10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 CCZ1BP86790 482 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 CCZ1P86791 482 aaPredicted RBP10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 BAATQ14032 418 aaPredicted RBP10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 SYCP1Q15431 976 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 PPP4R3AQ6IN85 833 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 KSR1Q8IVT5 923 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 ADSSL1Q8N142 457 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 DEF6Q9H4E7 631 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 NLRC4Q9NPP4 1024 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 RNF146Q9NTX7 359 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 ZHX1Q9UKY1 873 aaPredicted RBP10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 RABGAP1Q9Y3P9 1069 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 PCDHB13Q9Y5F0 798 aa10.4□□□□□ -0.75
NUDCD3-203ENST00000460110 RSPH10B2B2RC85 870 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 IPO5O00410 1097 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 BACH1O14867 736 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 RSPH10BP0C881 870 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 DNA2P51530 1060 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 PRELPP51888 382 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 RPS6P62753 249 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 GRM1Q13255 1194 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 CEP55Q53EZ4 464 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 MUM1L1Q5H9M0 696 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 NT5DC1Q5TFE4 455 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 MIER3Q7Z3K6 550 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 ZNF280CQ8ND82 737 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 KIF18AQ8NI77 898 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 WNK4Q96J92 1243 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 TAAR1Q96RJ0 339 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 BCAS3Q9H6U6 928 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 ELP3Q9H9T3 547 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 ZNHIT6Q9NWK9 470 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 STK17AQ9UEE5 414 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 LUC7L2Q9Y383 392 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 EML1O00423 815 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 C9orf131Q5VYM1 1079 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 DPY19L2Q6NUT2 758 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 RNF207Q6ZRF8 634 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 NAP1L4Q99733 375 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 EIF2AK1Q9BQI3 630 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 WDR11Q9BZH6 1224 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 ARHGEF35A5YM69 484 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 CTNND1O60716 968 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 CCNE1P24864 410 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 RPS12P25398 132 aaKnown RBP10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 KLK7P49862 253 aa10.39□□□□□ -0.75
NUDCD3-203ENST00000460110 FXR2P51116 673 aaKnown RBP eCLIP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms