RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 PAK6Q9NQU5 681 aaPredicted RBP7.53□□□□□ -1.2
CCDC50-203ENST00000460064 X6R8D5 127 aa7.53□□□□□ -1.2
CCDC50-203ENST00000460064 WASHC2CQ9Y4E1 1318 aa7.52□□□□□ -1.2
CCDC50-203ENST00000460064 PHLDB1Q86UU1 1377 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 NEMP1O14524 444 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 BPIP17213 487 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 TACR1P25103 407 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 ID4P47928 161 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 MECP2P51608 486 aaKnown RBP7.52□□□□□ -1.21
CCDC50-203ENST00000460064 JAM2P57087 298 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 PLCL1Q15111 1095 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 ARHGAP44Q17R89 818 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 BRDTQ58F21 947 aaPredicted RBP7.52□□□□□ -1.21
CCDC50-203ENST00000460064 ARHGAP36Q6ZRI8 547 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 EP400NLQ6ZTU2 488 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 LHFPL2Q6ZUX7 228 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 GPR101Q96P66 508 aaPredicted RBP7.52□□□□□ -1.21
CCDC50-203ENST00000460064 PLCD4Q9BRC7 762 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 IRF2BPLQ9H1B7 796 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 C19orf44Q9H6X5 657 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 PDLIM7Q9NR12 457 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 SLC5A4Q9NY91 659 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 ACSL6Q9UKU0 697 aa7.52□□□□□ -1.21
CCDC50-203ENST00000460064 NOTOA8MTQ0 251 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 GPR39O43194 453 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 PSPNO60542 156 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 FKBP9O95302 570 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 WNT11O96014 354 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 MSL3P1P0C860 447 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 ERVFC1P60507 584 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 TMPRSS15P98073 1019 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 CYP4F8P98187 520 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 EXOSC10Q01780 885 aaKnown RBP7.51□□□□□ -1.21
CCDC50-203ENST00000460064 DSG1Q02413 1049 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 GPR19Q15760 415 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 MROH9Q5TGP6 573 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 FKBP9P1Q75LS8 142 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 OTOP3Q7RTS5 596 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 Q8N1Y9 231 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 SMC1BQ8NDV3 1235 aa7.51□□□□□ -1.21
CCDC50-203ENST00000460064 THG1LQ9NWX6 298 aaKnown RBP7.51□□□□□ -1.21
CCDC50-203ENST00000460064 KIAA1324LA8MWY0 1029 aaPredicted RBP7.5□□□□□ -1.21
CCDC50-203ENST00000460064 NKRFO15226 690 aaKnown RBP eCLIP7.5□□□□□ -1.21
CCDC50-203ENST00000460064 KRT37O76014 449 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 S100BP04271 92 aaPredicted RBP7.5□□□□□ -1.21
CCDC50-203ENST00000460064 NTRK1P04629 796 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 ATP2A2P16615 1042 aaKnown RBP7.5□□□□□ -1.21
CCDC50-203ENST00000460064 GDNFP39905 211 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 ADCYAP1R1P41586 468 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 KPNA1P52294 538 aaPredicted RBP7.5□□□□□ -1.21
CCDC50-203ENST00000460064 BICRALQ6AI39 1079 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 NFXL1Q6ZNB6 911 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 AGBL5Q8NDL9 886 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 PIP4K2CQ8TBX8 421 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 CHTF18Q8WVB6 975 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 PCMTD2Q9NV79 361 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 FBLN5Q9UBX5 448 aa7.5□□□□□ -1.21
CCDC50-203ENST00000460064 TCRBV5S4A2TA0A5A2 114 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 SLC12A8A0AV02 714 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 ZNF561-AS1K7EIQ3 104 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 KRIT1O00522 736 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 KCNK3O14649 394 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 KATNA1O75449 491 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 AMY2AP04746 511 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 AMY2BP19961 511 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 TRHRP34981 398 aaPredicted RBP7.49□□□□□ -1.21
CCDC50-203ENST00000460064 OCRLQ01968 901 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 NR0B2Q15466 257 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 CABP7Q86V35 215 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 C11orf74Q86VG3 221 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 SPATS2Q86XZ4 545 aaKnown RBP7.49□□□□□ -1.21
CCDC50-203ENST00000460064 RIOX2Q8IUF8 465 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 SIRT2Q8IXJ6 389 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.49□□□□□ -1.21
CCDC50-203ENST00000460064 MYLIPQ8WY64 445 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 SMURF1Q9HCE7 757 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 SLC6A20Q9NP91 592 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 SPTLC3Q9NUV7 552 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 C19orf73Q9NVV2 129 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 KLHL42Q9P2K6 505 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 GPR160Q9UJ42 338 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 DSEQ9UL01 958 aa7.49□□□□□ -1.21
CCDC50-203ENST00000460064 G3BP2Q9UN86 482 aaKnown RBP7.49□□□□□ -1.21
CCDC50-203ENST00000460064 HPXP02790 462 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 RAC2P15153 192 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 LSSP48449 732 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 ITKQ08881 620 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 ATP13A4Q4VNC1 1196 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 OTOP1Q7RTM1 612 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 NECAB2Q7Z6G3 386 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 PTRH1Q86Y79 214 aaKnown RBP7.48□□□□□ -1.21
CCDC50-203ENST00000460064 BOCQ9BWV1 1114 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 SP110Q9HB58 689 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 MBNL3Q9NUK0 354 aaKnown RBP7.48□□□□□ -1.21
CCDC50-203ENST00000460064 ADAMTS6Q9UKP5 1117 aa7.48□□□□□ -1.21
CCDC50-203ENST00000460064 APOBEC2Q9Y235 224 aaKnown RBP7.48□□□□□ -1.21
CCDC50-203ENST00000460064 H7C1D1 291 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 MARCH6O60337 910 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 MAFKO60675 156 aa7.47□□□□□ -1.21
CCDC50-203ENST00000460064 ADAMTS4O75173 837 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms