RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CCL23P55773 120 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 ARHGAP1Q07960 439 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 TTLL4Q14679 1199 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 NTRK3Q16288 839 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 ARHGEF16Q5VV41 709 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 CCDC83Q8IWF9 413 aa17.93■□□□□ 0.46
SDF4-204ENST00000459994 CMTR1Q8N1G2 835 aaKnown RBP17.93■□□□□ 0.46
SDF4-204ENST00000459994 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.46
SDF4-204ENST00000459994 LLPHQ9BRT6 129 aaKnown RBP17.93■□□□□ 0.46
SDF4-204ENST00000459994 NOC4LQ9BVI4 516 aaKnown RBP17.93■□□□□ 0.46
SDF4-204ENST00000459994 A6NJR5 290 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 GRXCR1A8MXD5 290 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 CPLX1O14810 134 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 NKRFO15226 690 aaKnown RBP eCLIP17.92■□□□□ 0.46
SDF4-204ENST00000459994 SORBS3O60504 671 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 CDKL5O76039 1030 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 CYP2C9P11712 490 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 IFNAR1P17181 557 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 CPT1AP50416 773 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 FUT2Q10981 343 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 STXBP2Q15833 593 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 AFG1LQ8WV93 481 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 INTS4Q96HW7 963 aaKnown RBP17.92■□□□□ 0.46
SDF4-204ENST00000459994 SCLYQ96I15 445 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 PDCD2LQ9BRP1 358 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 MTG1Q9BT17 334 aaPredicted RBP17.92■□□□□ 0.46
SDF4-204ENST00000459994 SPZ1Q9BXG8 430 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 HIPK3Q9H422 1215 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 POLR3EQ9NVU0 708 aa17.92■□□□□ 0.46
SDF4-204ENST00000459994 MMP3P08254 477 aa17.91■□□□□ 0.46
SDF4-204ENST00000459994 MYCLP12524 364 aaPredicted RBP17.91■□□□□ 0.46
SDF4-204ENST00000459994 PGM5Q15124 567 aa17.91■□□□□ 0.46
SDF4-204ENST00000459994 ZNF365Q70YC5 407 aa17.91■□□□□ 0.46
SDF4-204ENST00000459994 SRBD1Q8N5C6 995 aaKnown RBP17.91■□□□□ 0.46
SDF4-204ENST00000459994 IWS1Q96ST2 819 aa17.91■□□□□ 0.46
SDF4-204ENST00000459994 MPHOSPH6Q99547 160 aaKnown RBP17.91■□□□□ 0.46
SDF4-204ENST00000459994 MAF1Q9H063 256 aa17.91■□□□□ 0.46
SDF4-204ENST00000459994 BCAS3Q9H6U6 928 aa17.91■□□□□ 0.46
SDF4-204ENST00000459994 DDX41Q9UJV9 622 aaKnown RBP17.91■□□□□ 0.46
SDF4-204ENST00000459994 PNMA6FA0A0J9YX94 578 aa17.9■□□□□ 0.46
SDF4-204ENST00000459994 CTDNEP1O95476 244 aa17.9■□□□□ 0.46
SDF4-204ENST00000459994 SMAD3P84022 425 aaKnown RBP17.9■□□□□ 0.46
SDF4-204ENST00000459994 PPIGQ13427 754 aaKnown RBP eCLIP17.9■□□□□ 0.46
SDF4-204ENST00000459994 RASIP1Q5U651 963 aa17.9■□□□□ 0.46
SDF4-204ENST00000459994 FCHSD1Q86WN1 690 aa17.9■□□□□ 0.46
SDF4-204ENST00000459994 TMEM199Q8N511 208 aa17.9■□□□□ 0.46
SDF4-204ENST00000459994 NSUN7Q8NE18 718 aaKnown RBP17.9■□□□□ 0.46
SDF4-204ENST00000459994 KAT2BQ92831 832 aa17.9■□□□□ 0.46
SDF4-204ENST00000459994 SEMA6BQ9H3T3 888 aa17.9■□□□□ 0.46
SDF4-204ENST00000459994 CXXC1Q9P0U4 656 aaPredicted RBP17.9■□□□□ 0.46
SDF4-204ENST00000459994 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
SDF4-204ENST00000459994 hCG_1642624A0A1W2PR95 340 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 B4DLN1 442 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 GH1P01241 217 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 PBX2P40425 430 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 MRPL12P52815 198 aaKnown RBP17.89■□□□□ 0.45
SDF4-204ENST00000459994 CHMP4BP1P59074 171 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 SP2Q02086 613 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 FAM47CQ5HY64 1035 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 ZNF697Q5TEC3 545 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 SMARCC2Q8TAQ2 1214 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 CTAGE1Q96RT6 745 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 IL23AQ9NPF7 189 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 STXBP5LQ9Y2K9 1186 aa17.89■□□□□ 0.45
SDF4-204ENST00000459994 PRPF3O43395 683 aaKnown RBP17.88■□□□□ 0.45
SDF4-204ENST00000459994 EIF3JO75822 258 aaKnown RBP17.88■□□□□ 0.45
SDF4-204ENST00000459994 RNF26Q9BY78 433 aaPredicted RBP17.88■□□□□ 0.45
SDF4-204ENST00000459994 TELO2Q9Y4R8 837 aa17.88■□□□□ 0.45
SDF4-204ENST00000459994 CNTNAP5Q8WYK1 1306 aa17.88■□□□□ 0.45
SDF4-204ENST00000459994 STK36Q9NRP7 1315 aa17.88■□□□□ 0.45
SDF4-204ENST00000459994 GCOM1H8Y6P7 765 aaPredicted RBP17.87■□□□□ 0.45
SDF4-204ENST00000459994 POLR2MP0CAP2 368 aa17.87■□□□□ 0.45
SDF4-204ENST00000459994 MRPS9P82933 396 aaKnown RBP17.87■□□□□ 0.45
SDF4-204ENST00000459994 HMGN5P82970 282 aaKnown RBP17.87■□□□□ 0.45
SDF4-204ENST00000459994 SSRP1Q08945 709 aaKnown RBP17.87■□□□□ 0.45
SDF4-204ENST00000459994 VSIG10LQ86VR7 867 aa17.87■□□□□ 0.45
SDF4-204ENST00000459994 TRIM22Q8IYM9 498 aa17.87■□□□□ 0.45
SDF4-204ENST00000459994 CDX2Q99626 313 aaPredicted RBP17.87■□□□□ 0.45
SDF4-204ENST00000459994 MRVI1Q9Y6F6 885 aa17.87■□□□□ 0.45
SDF4-204ENST00000459994 HSP90AA1P07900 732 aaKnown RBP17.86■□□□□ 0.45
SDF4-204ENST00000459994 ZNF286BP0CG31 522 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 DNAJB2P25686 324 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 SEMA3FQ13275 785 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 GDF6Q6KF10 455 aaPredicted RBP17.86■□□□□ 0.45
SDF4-204ENST00000459994 NFRKBQ6P4R8 1299 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 USP17L6PQ6QN14 398 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 OTOP2Q7RTS6 562 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 CCDC82Q8N4S0 544 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 MYLIPQ8WY64 445 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 PHKBQ93100 1093 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 SLC26A6Q9BXS9 759 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 MAP3K20Q9NYL2 800 aaKnown RBP17.86■□□□□ 0.45
SDF4-204ENST00000459994 SMC3Q9UQE7 1217 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 V9GY48 417 aaPredicted RBP17.86■□□□□ 0.45
SDF4-204ENST00000459994 FRMPD4Q14CM0 1322 aa17.86■□□□□ 0.45
SDF4-204ENST00000459994 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.85■□□□□ 0.45
SDF4-204ENST00000459994 MEIS2O14770 477 aa17.85■□□□□ 0.45
SDF4-204ENST00000459994 JAK2O60674 1132 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms