RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 PSD3Q9NYI0 1048 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 SLC4A4Q9Y6R1 1079 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 RIC1Q4ADV7 1423 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 USP17L8P0C7I0 530 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 TSPY3P0CV98 308 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 TSPY8P0CW00 308 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 GRAMD4Q6IC98 578 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 CNPY4Q8N129 248 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 APPBP2Q92624 585 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 ZNF274Q96GC6 653 aaPredicted RBP10.63□□□□□ -0.71
UFD1-205ENST00000459854 STAP2Q9UGK3 403 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 PAPPAQ13219 1627 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 CICQ96RK0 1608 aaPredicted RBP10.63□□□□□ -0.71
UFD1-205ENST00000459854 NNTQ13423 1086 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 C10orf76Q5T2E6 689 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 PBKQ96KB5 322 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 SUFUQ9UMX1 484 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 SIPA1L3O60292 1781 aaPredicted RBP10.63□□□□□ -0.71
UFD1-205ENST00000459854 VWA3AA6NCI4 1184 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 SERPINB6P35237 376 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 RWDD2BP57060 319 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 TTC6Q86TZ1 520 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 MCF2L2Q86YR7 1114 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 PANX2Q96RD6 677 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 TRIM31Q9BZY9 425 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 VPS37BQ9H9H4 285 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 KCNG1Q9UIX4 513 aa10.63□□□□□ -0.71
UFD1-205ENST00000459854 KLRG2A4D1S0 409 aaPredicted RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 KCNJ18B7U540 433 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 HNRNPCL1O60812 293 aaKnown RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 RPS12P25398 132 aaKnown RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 GJC1P36383 396 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 MMP14P50281 582 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 KCNJ12Q14500 433 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 C9orf131Q5VYM1 1079 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 TMEM87AQ8NBN3 555 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 DCPSQ96C86 337 aaKnown RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 CALR3Q96L12 384 aaKnown RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 RMDN2Q96LZ7 410 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 SERPINI1Q99574 410 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 ANTXR1Q9H6X2 564 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 CABP5Q9NP86 173 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 MUM1L1Q5H9M0 696 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 TMTC3Q6ZXV5 915 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 CCDC124Q96CT7 223 aaKnown RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 FAM96AQ9H5X1 160 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 ANGEL1Q9UNK9 670 aaKnown RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 UBR2Q8IWV8 1755 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 MAPK13O15264 365 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 MAN1A2O60476 641 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 TBC1D8O95759 1140 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 PICALMQ13492 652 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 RASGRF1Q13972 1273 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 PSMD6Q15008 389 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 C6orf118Q5T5N4 469 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 PPP1R2P3Q6NXS1 205 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 TJP1Q07157 1748 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 RASGRF2O14827 1237 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 ADKP55263 362 aaKnown RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 MIGA1Q8NAN2 632 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 NLGN2Q8NFZ4 835 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 OTUD7AQ8TE49 926 aaPredicted RBP10.62□□□□□ -0.71
UFD1-205ENST00000459854 LRGUKQ96M69 825 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 LZTS2Q9BRK4 669 aa10.62□□□□□ -0.71
UFD1-205ENST00000459854 THAP12O43422 761 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 SEC31AO94979 1220 aaKnown RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 SESN3P58005 492 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 ADCY2Q08462 1091 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 DCAF17Q5H9S7 520 aaPredicted RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 TTC38Q5R3I4 469 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 CDC37L1Q7L3B6 337 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 SRLQ86TD4 932 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 SULF1Q8IWU6 871 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 PARP9Q8IXQ6 854 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 POLLQ9UGP5 575 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 MTMR6Q9Y217 621 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 CTNND1O60716 968 aaKnown RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 ASPHQ12797 758 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 TTC19Q6DKK2 380 aaPredicted RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 PDLIM2Q96JY6 352 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 HAUS2Q9NVX0 235 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 SNAP23O00161 211 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 KCNK3O14649 394 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 N4BP1O75113 896 aaKnown RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 CYP2C19P33261 490 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 INPP1P49441 399 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 OCA2Q04671 838 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 MYSM1Q5VVJ2 828 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 KRT25Q7Z3Z0 450 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 FBXO33Q7Z6M2 555 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 PALM2Q8IXS6 379 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 CXorf38Q8TB03 319 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 KRT12Q99456 494 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 MOV10L1Q9BXT6 1211 aaKnown RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 SAMM50Q9Y512 469 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 C10orf71Q711Q0 1435 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 MBD4O95243 580 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 APOEP02649 317 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms