RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ZNF277Q9NRM2 450 aaPredicted RBP21.33■■□□□ 1.01
SNX27-204ENST00000458013 LONP1P36776 959 aaKnown RBP21.33■■□□□ 1
SNX27-204ENST00000458013 TRMT10CQ7L0Y3 403 aaKnown RBP21.33■■□□□ 1
SNX27-204ENST00000458013 TTC30AQ86WT1 665 aa21.33■■□□□ 1
SNX27-204ENST00000458013 HIPK4Q8NE63 616 aa21.33■■□□□ 1
SNX27-204ENST00000458013 IL9RQ01113 521 aa21.33■■□□□ 1
SNX27-204ENST00000458013 DPP9Q86TI2 863 aa21.33■■□□□ 1
SNX27-204ENST00000458013 HOOK2Q96ED9 719 aa21.33■■□□□ 1
SNX27-204ENST00000458013 CTTNBP2Q8WZ74 1663 aa21.33■■□□□ 1
SNX27-204ENST00000458013 ZBTB24O43167 697 aaPredicted RBP21.32■■□□□ 1
SNX27-204ENST00000458013 TTC4O95801 387 aa21.32■■□□□ 1
SNX27-204ENST00000458013 FAM160B1Q5W0V3 765 aa21.32■■□□□ 1
SNX27-204ENST00000458013 USP17L2Q6R6M4 530 aa21.32■■□□□ 1
SNX27-204ENST00000458013 MAML1Q92585 1016 aa21.32■■□□□ 1
SNX27-204ENST00000458013 AIFM3Q96NN9 605 aa21.32■■□□□ 1
SNX27-204ENST00000458013 CSRNP1Q96S65 589 aa21.32■■□□□ 1
SNX27-204ENST00000458013 IWS1Q96ST2 819 aa21.32■■□□□ 1
SNX27-204ENST00000458013 NHEJ1Q9H9Q4 299 aaPredicted RBP21.32■■□□□ 1
SNX27-204ENST00000458013 MCF2L2Q86YR7 1114 aa21.32■■□□□ 1
SNX27-204ENST00000458013 LCORLQ8N3X6 602 aa21.32■■□□□ 1
SNX27-204ENST00000458013 CCDC197Q8NCU1 140 aa21.32■■□□□ 1
SNX27-204ENST00000458013 CDKL2Q92772 493 aa21.32■■□□□ 1
SNX27-204ENST00000458013 NT5C1BQ96P26 610 aa21.32■■□□□ 1
SNX27-204ENST00000458013 SNX25Q9H3E2 840 aa21.32■■□□□ 1
SNX27-204ENST00000458013 KRT82Q9NSB4 513 aa21.32■■□□□ 1
SNX27-204ENST00000458013 HACD3Q9P035 362 aa21.32■■□□□ 1
SNX27-204ENST00000458013 ARHGEF10O15013 1369 aa21.32■■□□□ 1
SNX27-204ENST00000458013 CTTNQ14247 550 aaKnown RBP21.32■■□□□ 1
SNX27-204ENST00000458013 TMTC3Q6ZXV5 915 aa21.32■■□□□ 1
SNX27-204ENST00000458013 POLD4Q9HCU8 107 aa21.32■■□□□ 1
SNX27-204ENST00000458013 MSH2P43246 934 aa21.32■■□□□ 1
SNX27-204ENST00000458013 IQCB1Q15051 598 aa21.32■■□□□ 1
SNX27-204ENST00000458013 MAP3K21Q5TCX8 1036 aa21.32■■□□□ 1
SNX27-204ENST00000458013 ZNF804BA4D1E1 1349 aa21.32■■□□□ 1
SNX27-204ENST00000458013 ANKRD65E5RJM6 399 aa21.32■■□□□ 1
SNX27-204ENST00000458013 TMEM259Q4ZIN3 620 aa21.32■■□□□ 1
SNX27-204ENST00000458013 RPGRIP1Q96KN7 1286 aa21.32■■□□□ 1
SNX27-204ENST00000458013 FGD4Q96M96 766 aa21.32■■□□□ 1
SNX27-204ENST00000458013 CYTH2Q99418 400 aa21.32■■□□□ 1
SNX27-204ENST00000458013 PSMC2P35998 433 aaKnown RBP21.31■■□□□ 1
SNX27-204ENST00000458013 CDR2Q01850 454 aa21.31■■□□□ 1
SNX27-204ENST00000458013 NRBP2Q9NSY0 501 aa21.31■■□□□ 1
SNX27-204ENST00000458013 IPO11Q9UI26 975 aaKnown RBP21.31■■□□□ 1
SNX27-204ENST00000458013 YEATS2Q9ULM3 1422 aa21.31■■□□□ 1
SNX27-204ENST00000458013 MYO1FO00160 1098 aa21.31■■□□□ 1
SNX27-204ENST00000458013 LARGE1O95461 756 aa21.31■■□□□ 1
SNX27-204ENST00000458013 TCP1P17987 556 aaKnown RBP21.31■■□□□ 1
SNX27-204ENST00000458013 PDZD4Q76G19 769 aaPredicted RBP21.31■■□□□ 1
SNX27-204ENST00000458013 USP17L8P0C7I0 530 aa21.31■■□□□ 1
SNX27-204ENST00000458013 RSRC2Q7L4I2 434 aaKnown RBP21.31■■□□□ 1
SNX27-204ENST00000458013 FAM186BQ8IYM0 893 aa21.31■■□□□ 1
SNX27-204ENST00000458013 KITP10721 976 aa21.31■■□□□ 1
SNX27-204ENST00000458013 GOLGA5Q8TBA6 731 aa21.31■■□□□ 1
SNX27-204ENST00000458013 Q9H521 79 aa21.31■■□□□ 1
SNX27-204ENST00000458013 USP17L3A6NCW0 530 aa21.31■■□□□ 1
SNX27-204ENST00000458013 USP17L4A6NCW7 530 aa21.31■■□□□ 1
SNX27-204ENST00000458013 USP17L1Q7RTZ2 530 aa21.31■■□□□ 1
SNX27-204ENST00000458013 ABCC4O15439 1325 aa21.31■■□□□ 1
SNX27-204ENST00000458013 LMNB1P20700 586 aa21.3■■□□□ 1
SNX27-204ENST00000458013 PRPF38AQ8NAV1 312 aaKnown RBP21.3■■□□□ 1
SNX27-204ENST00000458013 OR6B2Q6IFH4 312 aa21.3■■□□□ 1
SNX27-204ENST00000458013 GSPT2Q8IYD1 628 aaKnown RBP21.3■■□□□ 1
SNX27-204ENST00000458013 HAUS4Q9H6D7 363 aa21.3■■□□□ 1
SNX27-204ENST00000458013 STMN1P16949 149 aa21.3■■□□□ 1
SNX27-204ENST00000458013 ATP2B4P23634 1241 aa21.3■■□□□ 1
SNX27-204ENST00000458013 ETF1P62495 437 aaKnown RBP21.3■■□□□ 1
SNX27-204ENST00000458013 ASAP1Q9ULH1 1129 aa21.3■■□□□ 1
SNX27-204ENST00000458013 NUP153P49790 1475 aaKnown RBP21.3■■□□□ 1
SNX27-204ENST00000458013 ZNF18P17022 549 aa21.3■■□□□ 1
SNX27-204ENST00000458013 RAB44Q7Z6P3 723 aaPredicted RBP21.3■■□□□ 1
SNX27-204ENST00000458013 P2RX5Q93086 422 aa21.3■■□□□ 1
SNX27-204ENST00000458013 PUS7LQ9H0K6 701 aaKnown RBP21.3■■□□□ 1
SNX27-204ENST00000458013 RGS12O14924 1447 aa21.3■■□□□ 1
SNX27-204ENST00000458013 CRKLP46109 303 aaKnown RBP21.3■■□□□ 1
SNX27-204ENST00000458013 NSUN2Q08J23 767 aaKnown RBP eCLIP21.3■■□□□ 1
SNX27-204ENST00000458013 TM6SF1Q9BZW5 370 aa21.3■■□□□ 1
SNX27-204ENST00000458013 NOVA2Q9UNW9 492 aaKnown RBP21.3■■□□□ 1
SNX27-204ENST00000458013 SRGAP2CP0DJJ0 459 aa21.3■■□□□ 1
SNX27-204ENST00000458013 XPAP23025 273 aaPredicted RBP21.3■■□□□ 1
SNX27-204ENST00000458013 ANGPTL8Q6UXH0 198 aa21.3■■□□□ 1
SNX27-204ENST00000458013 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.3■■□□□ 1
SNX27-204ENST00000458013 RRP15Q9Y3B9 282 aaKnown RBP21.3■■□□□ 1
SNX27-204ENST00000458013 MAST1Q9Y2H9 1570 aa21.29■■□□□ 1
SNX27-204ENST00000458013 RBM6P78332 1123 aaKnown RBP21.29■■□□□ 1
SNX27-204ENST00000458013 SPOPLQ6IQ16 392 aa21.29■■□□□ 1
SNX27-204ENST00000458013 ARHGEF18Q6ZSZ5 1173 aa21.29■■□□□ 1
SNX27-204ENST00000458013 SUN1O94901 812 aa21.29■■□□□ 1
SNX27-204ENST00000458013 CCDC195A0A1B0GUA6 201 aa21.29■■□□□ 1
SNX27-204ENST00000458013 GOLGA8MH3BSY2 632 aa21.29■■□□□ 1
SNX27-204ENST00000458013 SRGAP2O75044 1071 aa21.29■■□□□ 1
SNX27-204ENST00000458013 EIF4A3P38919 411 aaKnown RBP21.29■■□□□ 1
SNX27-204ENST00000458013 RNASELQ05823 741 aaKnown RBP21.29■■□□□ 1
SNX27-204ENST00000458013 ANO4Q32M45 955 aa21.29■■□□□ 1
SNX27-204ENST00000458013 HEXIM2Q96MH2 286 aaKnown RBP21.29■■□□□ 1
SNX27-204ENST00000458013 DBNLQ9UJU6 430 aaKnown RBP21.29■■□□□ 1
SNX27-204ENST00000458013 PCDHA13Q9Y5I0 950 aa21.29■■□□□ 1
SNX27-204ENST00000458013 KDM5AP29375 1690 aaKnown RBP21.29■■□□□ 1
SNX27-204ENST00000458013 HOXB7P09629 217 aa21.29■■□□□ 1
SNX27-204ENST00000458013 EEF1B2P24534 225 aaKnown RBP21.29■■□□□ 1
SNX27-204ENST00000458013 DHX9Q08211 1270 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms