RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 COX16Q9P0S2 106 aa12.78□□□□□ -0.36
SMARCAD1-204ENST00000457823 GDAQ9Y2T3 454 aa12.78□□□□□ -0.36
SMARCAD1-204ENST00000457823 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 USP14P54578 494 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 CYB5R4Q7L1T6 521 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 CCDC13Q8IYE1 715 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 SLC44A5Q8NCS7 719 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 GH2P01242 217 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 ATF2P15336 505 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 CASP1P29466 404 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 CAPS2Q9BXY5 557 aa12.77□□□□□ -0.36
SMARCAD1-204ENST00000457823 BUB1BO60566 1050 aaPredicted RBP12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 FTCDO95954 541 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 NPR1P16066 1061 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 AFAP1L2Q8N4X5 818 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 EPB41L5Q9HCM4 733 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 MED4Q9NPJ6 270 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 ADD3Q9UEY8 706 aaKnown RBP12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 ADAMTS1Q9UHI8 967 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 NUB1Q9Y5A7 615 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 SEC31AO94979 1220 aaKnown RBP12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 PHBP35232 272 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 TFAMQ00059 246 aaKnown RBP12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 ARID5BQ14865 1188 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 FAM149B1Q96BN6 582 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 HAUS1Q96CS2 278 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 BEGAINQ9BUH8 593 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 GCNT4Q9P109 453 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 KLHL14Q9P2G3 628 aa12.77□□□□□ -0.37
SMARCAD1-204ENST00000457823 H7C0C1 242 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 NDUFA10O95299 355 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 TROVE2P10155 538 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 ATP5OP48047 213 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 ARHGAP24Q8N264 748 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 NME8Q8N427 588 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 TYW1Q9NV66 732 aaKnown RBP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 DAAM1Q9Y4D1 1078 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 GOLGA8KD6RF30 607 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 HEXIM1O94992 359 aaKnown RBP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 TFDP1Q14186 410 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 KRT31Q15323 416 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 CDHR1Q96JP9 859 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 MAD1L1Q9Y6D9 718 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 RPAP1Q9BWH6 1393 aaPredicted RBP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 NEDD4P46934 1319 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 SFI1A8K8P3 1242 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 NMT2O60551 498 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 RXRBP28702 533 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 MAPK4P31152 587 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 MXI1P50539 228 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 CTTNQ14247 550 aaKnown RBP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 MTERF2Q49AM1 385 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 TTBK2Q6IQ55 1244 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 TMEM206Q9H813 350 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 CD209Q9NNX6 404 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 UBE2TQ9NPD8 197 aaPredicted RBP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 NXF1Q9UBU9 619 aaKnown RBP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 AKT3Q9Y243 479 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 GOLGA8SH3BPF8 625 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 CCNA1P78396 465 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 PSMD2Q13200 908 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 MAP7D3Q8IWC1 876 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 ENAHQ8N8S7 591 aaPredicted RBP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 SLC17A8Q8NDX2 589 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 DCP1AQ9NPI6 582 aaPredicted RBP12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 TACC3Q9Y6A5 838 aa12.76□□□□□ -0.37
SMARCAD1-204ENST00000457823 JPH2Q9BR39 696 aaPredicted RBP12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 THAP9Q9H5L6 903 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 NHEJ1Q9H9Q4 299 aaPredicted RBP12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 SEPT10Q9P0V9 454 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 FAM196BA6NMK8 535 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 USP17L5A8MUK1 530 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 C21orf2O43822 256 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 PLTPP55058 493 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 CCDC170Q8IYT3 715 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 OXER1Q8TDS5 423 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 SETD1BQ9UPS6 1966 aaKnown RBP12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 A0A1B0GUA9 196 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 MOCS3O95396 460 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 CUL4BQ13620 913 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 RESP18Q5W5W9 173 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 TTC19Q6DKK2 380 aaPredicted RBP12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 TMEM179Q6ZVK1 233 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 PDZD4Q76G19 769 aaPredicted RBP12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 FAM71BQ8TC56 605 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 WDR70Q9NW82 654 aa12.75□□□□□ -0.37
SMARCAD1-204ENST00000457823 POC1B-GALNT4F8VUJ3 575 aa12.74□□□□□ -0.37
SMARCAD1-204ENST00000457823 IFNAR2P48551 515 aa12.74□□□□□ -0.37
SMARCAD1-204ENST00000457823 TCP11X2Q5H9J9 407 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms